Gene : Phvul.001G094500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21109 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 Genomic Order:  916
Name:  ? Phvul.001G094500 Secondary Identifier:  ? PAC:37171186
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G094500 0.5kb upstream 0.5kb upstream 2771 true Chr01: 17652598-17655368 Phaseolus vulgaris
Phvul.001G094500 0.5kb upstream 0.5kb upstream 500 false Chr01: 17652598-17653097 Phaseolus vulgaris
Phvul.001G094500 0.5kb downstream 0.5kb downstream 2771 true Chr01: 17653098-17655868 Phaseolus vulgaris
Phvul.001G094500 0.5kb downstream 0.5kb downstream 500 false Chr01: 17655369-17655868 Phaseolus vulgaris
Phvul.001G094500 1.0kb upstream 1.0kb upstream 3271 true Chr01: 17652098-17655368 Phaseolus vulgaris
Phvul.001G094500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17652098-17653097 Phaseolus vulgaris
Phvul.001G094500 1.0kb downstream 1.0kb downstream 3271 true Chr01: 17653098-17656368 Phaseolus vulgaris
Phvul.001G094500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17655369-17656368 Phaseolus vulgaris
Phvul.001G094500 2.0kb upstream 2.0kb upstream 4271 true Chr01: 17651098-17655368 Phaseolus vulgaris
Phvul.001G094500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17651098-17653097 Phaseolus vulgaris
Phvul.001G094500 2.0kb downstream 2.0kb downstream 4271 true Chr01: 17653098-17657368 Phaseolus vulgaris
Phvul.001G094500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17655369-17657368 Phaseolus vulgaris
Phvul.001G094500 5.0kb upstream 5.0kb upstream 7271 true Chr01: 17648098-17655368 Phaseolus vulgaris
Phvul.001G094500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17648098-17653097 Phaseolus vulgaris
Phvul.001G094500 5.0kb downstream 5.0kb downstream 7271 true Chr01: 17653098-17660368 Phaseolus vulgaris
Phvul.001G094500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17655369-17660368 Phaseolus vulgaris
Phvul.001G094500 10.0kb upstream 10.0kb upstream 12271 true Chr01: 17643098-17655368 Phaseolus vulgaris
Phvul.001G094500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17643098-17653097 Phaseolus vulgaris
Phvul.001G094500 10.0kb downstream 10.0kb downstream 12271 true Chr01: 17653098-17665368 Phaseolus vulgaris
Phvul.001G094500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17655369-17665368 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027800 5273 Angiosperm View MSA
122310334 5265 Fabidae View MSA
124065865 5270 Rosid View MSA
123745699 5271 Pentapetalae View MSA
122793832 5272 Eudicot View MSA
121349916 5274 Embryophyte View MSA
123426860 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.0337 0.0 147.423 High  
cufflinks 66.1011 0.0 171.032 High  
cufflinks 431.694 0.0 1326.96 High High
cufflinks 63.0229 0.0 163.162 High  
cufflinks 37.4211 0.0 97.5256 High  
cufflinks 171.083 0.0 468.308 High High
cufflinks 6.86759 0.0 20.5281   Low
cufflinks 9.44584 0.0 27.5186   Low
cufflinks 8.02221 0.0 23.522   Low
cufflinks 18.8715 0.0 51.6641    
cufflinks 29.6177 0.0 77.965    

0 Strain