Gene : Phvul.001G078300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10000:SF8 - HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3 Genomic Order:  791
Name:  ? Phvul.001G078300 Secondary Identifier:  ? PAC:37169414
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUCOSE1PMETAB-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3881 Phaseolus vulgaris pathologic  
Pvulgaris PWY-882 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G078300 0.5kb upstream 0.5kb upstream 13873 true Chr01: 11735742-11749614 Phaseolus vulgaris
Phvul.001G078300 0.5kb upstream 0.5kb upstream 500 false Chr01: 11735742-11736241 Phaseolus vulgaris
Phvul.001G078300 0.5kb downstream 0.5kb downstream 13873 true Chr01: 11736242-11750114 Phaseolus vulgaris
Phvul.001G078300 0.5kb downstream 0.5kb downstream 500 false Chr01: 11749615-11750114 Phaseolus vulgaris
Phvul.001G078300 1.0kb upstream 1.0kb upstream 14373 true Chr01: 11735242-11749614 Phaseolus vulgaris
Phvul.001G078300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11735242-11736241 Phaseolus vulgaris
Phvul.001G078300 1.0kb downstream 1.0kb downstream 14373 true Chr01: 11736242-11750614 Phaseolus vulgaris
Phvul.001G078300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11749615-11750614 Phaseolus vulgaris
Phvul.001G078300 2.0kb upstream 2.0kb upstream 15373 true Chr01: 11734242-11749614 Phaseolus vulgaris
Phvul.001G078300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11734242-11736241 Phaseolus vulgaris
Phvul.001G078300 2.0kb downstream 2.0kb downstream 15373 true Chr01: 11736242-11751614 Phaseolus vulgaris
Phvul.001G078300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11749615-11751614 Phaseolus vulgaris
Phvul.001G078300 5.0kb upstream 5.0kb upstream 18373 true Chr01: 11731242-11749614 Phaseolus vulgaris
Phvul.001G078300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11731242-11736241 Phaseolus vulgaris
Phvul.001G078300 5.0kb downstream 5.0kb downstream 18373 true Chr01: 11736242-11754614 Phaseolus vulgaris
Phvul.001G078300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11749615-11754614 Phaseolus vulgaris
Phvul.001G078300 10.0kb upstream 10.0kb upstream 23373 true Chr01: 11726242-11749614 Phaseolus vulgaris
Phvul.001G078300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11726242-11736241 Phaseolus vulgaris
Phvul.001G078300 10.0kb downstream 10.0kb downstream 23373 true Chr01: 11736242-11759614 Phaseolus vulgaris
Phvul.001G078300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11749615-11759614 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303217 5265 Fabidae View MSA
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.972 0.0 33.3809    
cufflinks 7.74397 0.0 24.4437    
cufflinks 24.1552 0.0 76.9554   High
cufflinks 13.2347 0.0 43.1964    
cufflinks 7.01864 0.0 21.9901    
cufflinks 19.3433 0.0 61.453   High
cufflinks 6.78223 0.0 24.2923    
cufflinks 6.33305 0.0 19.8329    
cufflinks 7.20847 0.0 22.8726    
cufflinks 8.3868 0.0 25.8674    
cufflinks 7.52069 0.0 23.1539    

0 Strain