Gene : Phvul.001G077000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22950:SF278 - AMINO ACID PERMEASE 1-RELATED Genomic Order:  778
Name:  ? Phvul.001G077000 Secondary Identifier:  ? PAC:37170526
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G077000 0.5kb upstream 0.5kb upstream 5885 true Chr01: 11268309-11274193 Phaseolus vulgaris
Phvul.001G077000 0.5kb upstream 0.5kb upstream 500 false Chr01: 11268309-11268808 Phaseolus vulgaris
Phvul.001G077000 0.5kb downstream 0.5kb downstream 5885 true Chr01: 11268809-11274693 Phaseolus vulgaris
Phvul.001G077000 0.5kb downstream 0.5kb downstream 500 false Chr01: 11274194-11274693 Phaseolus vulgaris
Phvul.001G077000 1.0kb upstream 1.0kb upstream 6385 true Chr01: 11267809-11274193 Phaseolus vulgaris
Phvul.001G077000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11267809-11268808 Phaseolus vulgaris
Phvul.001G077000 1.0kb downstream 1.0kb downstream 6385 true Chr01: 11268809-11275193 Phaseolus vulgaris
Phvul.001G077000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11274194-11275193 Phaseolus vulgaris
Phvul.001G077000 2.0kb upstream 2.0kb upstream 7385 true Chr01: 11266809-11274193 Phaseolus vulgaris
Phvul.001G077000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11266809-11268808 Phaseolus vulgaris
Phvul.001G077000 2.0kb downstream 2.0kb downstream 7385 true Chr01: 11268809-11276193 Phaseolus vulgaris
Phvul.001G077000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11274194-11276193 Phaseolus vulgaris
Phvul.001G077000 5.0kb upstream 5.0kb upstream 10385 true Chr01: 11263809-11274193 Phaseolus vulgaris
Phvul.001G077000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11263809-11268808 Phaseolus vulgaris
Phvul.001G077000 5.0kb downstream 5.0kb downstream 10385 true Chr01: 11268809-11279193 Phaseolus vulgaris
Phvul.001G077000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11274194-11279193 Phaseolus vulgaris
Phvul.001G077000 10.0kb upstream 10.0kb upstream 15385 true Chr01: 11258809-11274193 Phaseolus vulgaris
Phvul.001G077000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11258809-11268808 Phaseolus vulgaris
Phvul.001G077000 10.0kb downstream 10.0kb downstream 15385 true Chr01: 11268809-11284193 Phaseolus vulgaris
Phvul.001G077000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11274194-11284193 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255271 5265 Fabidae View MSA
124060792 5270 Rosid View MSA
123749377 5271 Pentapetalae View MSA
122789981 5272 Eudicot View MSA
122044939 5273 Angiosperm View MSA
121310365 5274 Embryophyte View MSA
123347867 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 341.763 0.0 1188.34 High High
cufflinks 31.9266 0.0 82.8424    
cufflinks 18.9938 0.0 49.2225    
cufflinks 27.497 0.0 71.1082    
cufflinks 44.0159 0.0 115.358 High  
cufflinks 5.98899 0.0 16.7406    
cufflinks 4.7821 0.0 13.6423   Low
cufflinks 2.48021 0.0 7.59233   Low
cufflinks 7.40879 0.0 20.3286    
cufflinks 51.6072 0.0 137.019 High  
cufflinks 22.9295 0.0 59.2846    

0 Strain