Gene : Phvul.001G082700 P. vulgaris v2.1
Defline:  (1 of 1) 3.6.1.31 - Phosphoribosyl-ATP diphosphatase / Phosphoribosyladenosine triphosphate pyrophosphatase Genomic Order:  806
Name:  ? Phvul.001G082700 Secondary Identifier:  ? PAC:37170847
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris HISTSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G082700 0.5kb upstream 0.5kb upstream 3760 true Chr01: 12486255-12490014 Phaseolus vulgaris
Phvul.001G082700 0.5kb upstream 0.5kb upstream 500 false Chr01: 12486255-12486754 Phaseolus vulgaris
Phvul.001G082700 0.5kb downstream 0.5kb downstream 3760 true Chr01: 12486755-12490514 Phaseolus vulgaris
Phvul.001G082700 0.5kb downstream 0.5kb downstream 500 false Chr01: 12490015-12490514 Phaseolus vulgaris
Phvul.001G082700 1.0kb upstream 1.0kb upstream 4260 true Chr01: 12485755-12490014 Phaseolus vulgaris
Phvul.001G082700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12485755-12486754 Phaseolus vulgaris
Phvul.001G082700 1.0kb downstream 1.0kb downstream 4260 true Chr01: 12486755-12491014 Phaseolus vulgaris
Phvul.001G082700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12490015-12491014 Phaseolus vulgaris
Phvul.001G082700 2.0kb upstream 2.0kb upstream 5260 true Chr01: 12484755-12490014 Phaseolus vulgaris
Phvul.001G082700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12484755-12486754 Phaseolus vulgaris
Phvul.001G082700 2.0kb downstream 2.0kb downstream 5260 true Chr01: 12486755-12492014 Phaseolus vulgaris
Phvul.001G082700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12490015-12492014 Phaseolus vulgaris
Phvul.001G082700 5.0kb upstream 5.0kb upstream 8260 true Chr01: 12481755-12490014 Phaseolus vulgaris
Phvul.001G082700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12481755-12486754 Phaseolus vulgaris
Phvul.001G082700 5.0kb downstream 5.0kb downstream 8260 true Chr01: 12486755-12495014 Phaseolus vulgaris
Phvul.001G082700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12490015-12495014 Phaseolus vulgaris
Phvul.001G082700 10.0kb upstream 10.0kb upstream 13260 true Chr01: 12476755-12490014 Phaseolus vulgaris
Phvul.001G082700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12476755-12486754 Phaseolus vulgaris
Phvul.001G082700 10.0kb downstream 10.0kb downstream 13260 true Chr01: 12486755-12500014 Phaseolus vulgaris
Phvul.001G082700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12490015-12500014 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304181 5265 Fabidae View MSA
124060953 5270 Rosid View MSA
123746626 5271 Pentapetalae View MSA
122789417 5272 Eudicot View MSA
122047358 5273 Angiosperm View MSA
121345826 5274 Embryophyte View MSA
123423910 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.10029 0.0 32.5292    
cufflinks 9.44803 0.0 42.3979   High
cufflinks 6.24154 0.0 21.921    
cufflinks 11.2863 0.0 49.0907   High
cufflinks 6.19749 0.0 30.8589    
cufflinks 6.72761 0.0 31.4684    
cufflinks 6.71803 0.0 27.5938    
cufflinks 7.90832 0.0 35.4175    
cufflinks 6.65777 0.0 27.4147    
cufflinks 6.17764 0.0 25.988    
cufflinks 5.79601 0.0 25.4548   Low

0 Strain