Gene : Phvul.001G084200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF9 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  819
Name:  ? Phvul.001G084200 Secondary Identifier:  ? PAC:37170485
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G084200 0.5kb upstream 0.5kb upstream 1469 true Chr01: 12957528-12958996 Phaseolus vulgaris
Phvul.001G084200 0.5kb upstream 0.5kb upstream 500 false Chr01: 12958497-12958996 Phaseolus vulgaris
Phvul.001G084200 0.5kb downstream 0.5kb downstream 1469 true Chr01: 12957028-12958496 Phaseolus vulgaris
Phvul.001G084200 0.5kb downstream 0.5kb downstream 500 false Chr01: 12957028-12957527 Phaseolus vulgaris
Phvul.001G084200 1.0kb upstream 1.0kb upstream 1969 true Chr01: 12957528-12959496 Phaseolus vulgaris
Phvul.001G084200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12958497-12959496 Phaseolus vulgaris
Phvul.001G084200 1.0kb downstream 1.0kb downstream 1969 true Chr01: 12956528-12958496 Phaseolus vulgaris
Phvul.001G084200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12956528-12957527 Phaseolus vulgaris
Phvul.001G084200 2.0kb upstream 2.0kb upstream 2969 true Chr01: 12957528-12960496 Phaseolus vulgaris
Phvul.001G084200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12958497-12960496 Phaseolus vulgaris
Phvul.001G084200 2.0kb downstream 2.0kb downstream 2969 true Chr01: 12955528-12958496 Phaseolus vulgaris
Phvul.001G084200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12955528-12957527 Phaseolus vulgaris
Phvul.001G084200 5.0kb upstream 5.0kb upstream 5969 true Chr01: 12957528-12963496 Phaseolus vulgaris
Phvul.001G084200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12958497-12963496 Phaseolus vulgaris
Phvul.001G084200 5.0kb downstream 5.0kb downstream 5969 true Chr01: 12952528-12958496 Phaseolus vulgaris
Phvul.001G084200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12952528-12957527 Phaseolus vulgaris
Phvul.001G084200 10.0kb upstream 10.0kb upstream 10969 true Chr01: 12957528-12968496 Phaseolus vulgaris
Phvul.001G084200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12958497-12968496 Phaseolus vulgaris
Phvul.001G084200 10.0kb downstream 10.0kb downstream 10969 true Chr01: 12947528-12958496 Phaseolus vulgaris
Phvul.001G084200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12947528-12957527 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308586 5265 Fabidae View MSA
124065718 5270 Rosid View MSA
123747007 5271 Pentapetalae View MSA
122792186 5272 Eudicot View MSA
122046110 5273 Angiosperm View MSA
121350750 5274 Embryophyte View MSA
123381874 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.0244 0.0 104.17 High  
cufflinks 26.5243 0.0 70.7141    
cufflinks 15.3212 0.0 42.9823   Low
cufflinks 48.7494 0.0 126.042 High High
cufflinks 28.1605 0.0 74.4426    
cufflinks 19.5274 0.0 53.4633   Low
cufflinks 24.9388 0.0 66.4285    
cufflinks 22.513 0.0 60.9298    
cufflinks 35.2835 0.0 92.2248 High  
cufflinks 34.0527 0.0 89.3091    
cufflinks 38.9714 0.0 101.363 High  

0 Strain