Gene : Phvul.001G088100 P. vulgaris v2.1
Genomic Order:  857 Name:  ? Phvul.001G088100
Secondary Identifier:  ? PAC:37170665
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G088100 0.5kb upstream 0.5kb upstream 8111 true Chr01: 13837408-13845518 Phaseolus vulgaris
Phvul.001G088100 0.5kb upstream 0.5kb upstream 500 false Chr01: 13845019-13845518 Phaseolus vulgaris
Phvul.001G088100 0.5kb downstream 0.5kb downstream 8111 true Chr01: 13836908-13845018 Phaseolus vulgaris
Phvul.001G088100 0.5kb downstream 0.5kb downstream 500 false Chr01: 13836908-13837407 Phaseolus vulgaris
Phvul.001G088100 1.0kb upstream 1.0kb upstream 8611 true Chr01: 13837408-13846018 Phaseolus vulgaris
Phvul.001G088100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13845019-13846018 Phaseolus vulgaris
Phvul.001G088100 1.0kb downstream 1.0kb downstream 8611 true Chr01: 13836408-13845018 Phaseolus vulgaris
Phvul.001G088100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13836408-13837407 Phaseolus vulgaris
Phvul.001G088100 2.0kb upstream 2.0kb upstream 9611 true Chr01: 13837408-13847018 Phaseolus vulgaris
Phvul.001G088100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13845019-13847018 Phaseolus vulgaris
Phvul.001G088100 2.0kb downstream 2.0kb downstream 9611 true Chr01: 13835408-13845018 Phaseolus vulgaris
Phvul.001G088100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13835408-13837407 Phaseolus vulgaris
Phvul.001G088100 5.0kb upstream 5.0kb upstream 12611 true Chr01: 13837408-13850018 Phaseolus vulgaris
Phvul.001G088100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13845019-13850018 Phaseolus vulgaris
Phvul.001G088100 5.0kb downstream 5.0kb downstream 12611 true Chr01: 13832408-13845018 Phaseolus vulgaris
Phvul.001G088100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13832408-13837407 Phaseolus vulgaris
Phvul.001G088100 10.0kb upstream 10.0kb upstream 17611 true Chr01: 13837408-13855018 Phaseolus vulgaris
Phvul.001G088100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13845019-13855018 Phaseolus vulgaris
Phvul.001G088100 10.0kb downstream 10.0kb downstream 17611 true Chr01: 13827408-13845018 Phaseolus vulgaris
Phvul.001G088100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13827408-13837407 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300176 5265 Fabidae View MSA
124070616 5270 Rosid View MSA
123745722 5271 Pentapetalae View MSA
122786878 5272 Eudicot View MSA
122041909 5273 Angiosperm View MSA
121348701 5274 Embryophyte View MSA
123380980 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.42029 0.0 26.2134   Low
cufflinks 9.47642 0.0 28.6631    
cufflinks 9.53063 0.0 32.0263    
cufflinks 6.78683 0.0 24.5617   Low
cufflinks 9.2446 0.0 31.6024    
cufflinks 8.02972 0.0 27.9599    
cufflinks 13.7099 0.0 44.3304   High
cufflinks 13.2526 0.0 42.8037   High
cufflinks 13.3135 0.0 43.1981   High
cufflinks 14.4535 0.0 46.5272   High
cufflinks 8.93541 0.0 30.7815    

0 Strain