Gene : Phvul.001G087100 P. vulgaris v2.1
Defline:  (1 of 18) PF02893 - GRAM domain (GRAM) Genomic Order:  848
Name:  ? Phvul.001G087100 Secondary Identifier:  ? PAC:37168636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G087100 0.5kb upstream 0.5kb upstream 2773 true Chr01: 13512244-13515016 Phaseolus vulgaris
Phvul.001G087100 0.5kb upstream 0.5kb upstream 500 false Chr01: 13512244-13512743 Phaseolus vulgaris
Phvul.001G087100 0.5kb downstream 0.5kb downstream 2773 true Chr01: 13512744-13515516 Phaseolus vulgaris
Phvul.001G087100 0.5kb downstream 0.5kb downstream 500 false Chr01: 13515017-13515516 Phaseolus vulgaris
Phvul.001G087100 1.0kb upstream 1.0kb upstream 3273 true Chr01: 13511744-13515016 Phaseolus vulgaris
Phvul.001G087100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13511744-13512743 Phaseolus vulgaris
Phvul.001G087100 1.0kb downstream 1.0kb downstream 3273 true Chr01: 13512744-13516016 Phaseolus vulgaris
Phvul.001G087100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13515017-13516016 Phaseolus vulgaris
Phvul.001G087100 2.0kb upstream 2.0kb upstream 4273 true Chr01: 13510744-13515016 Phaseolus vulgaris
Phvul.001G087100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13510744-13512743 Phaseolus vulgaris
Phvul.001G087100 2.0kb downstream 2.0kb downstream 4273 true Chr01: 13512744-13517016 Phaseolus vulgaris
Phvul.001G087100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13515017-13517016 Phaseolus vulgaris
Phvul.001G087100 5.0kb upstream 5.0kb upstream 7273 true Chr01: 13507744-13515016 Phaseolus vulgaris
Phvul.001G087100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13507744-13512743 Phaseolus vulgaris
Phvul.001G087100 5.0kb downstream 5.0kb downstream 7273 true Chr01: 13512744-13520016 Phaseolus vulgaris
Phvul.001G087100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13515017-13520016 Phaseolus vulgaris
Phvul.001G087100 10.0kb upstream 10.0kb upstream 12273 true Chr01: 13502744-13515016 Phaseolus vulgaris
Phvul.001G087100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13502744-13512743 Phaseolus vulgaris
Phvul.001G087100 10.0kb downstream 10.0kb downstream 12273 true Chr01: 13512744-13525016 Phaseolus vulgaris
Phvul.001G087100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13515017-13525016 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311278 5265 Fabidae View MSA
124071100 5270 Rosid View MSA
123744777 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.2927 0.0 101.593 High High
cufflinks 9.02032 0.0 25.2383    
cufflinks 1.78419 0.0 5.95613   Low
cufflinks 7.5467 0.0 21.4564    
cufflinks 5.11351 0.0 15.173    
cufflinks 1.81223 0.0 6.04977   Low
cufflinks 12.0 0.0 32.5935    
cufflinks 7.52135 0.0 21.2948    
cufflinks 5.13431 0.0 15.1416    
cufflinks 39.4422 0.0 101.982 High High
cufflinks 4.43183 0.0 13.3629    

0 Strain