Gene : Phvul.001G070600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13561:SF20 - MUTAGEN-SENSITIVE 101 Genomic Order:  715
Name:  ? Phvul.001G070600 Secondary Identifier:  ? PAC:37168330
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G070600 0.5kb upstream 0.5kb upstream 15526 true Chr01: 9291163-9306688 Phaseolus vulgaris
Phvul.001G070600 0.5kb upstream 0.5kb upstream 500 false Chr01: 9291163-9291662 Phaseolus vulgaris
Phvul.001G070600 0.5kb downstream 0.5kb downstream 15526 true Chr01: 9291663-9307188 Phaseolus vulgaris
Phvul.001G070600 0.5kb downstream 0.5kb downstream 500 false Chr01: 9306689-9307188 Phaseolus vulgaris
Phvul.001G070600 1.0kb upstream 1.0kb upstream 16026 true Chr01: 9290663-9306688 Phaseolus vulgaris
Phvul.001G070600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9290663-9291662 Phaseolus vulgaris
Phvul.001G070600 1.0kb downstream 1.0kb downstream 16026 true Chr01: 9291663-9307688 Phaseolus vulgaris
Phvul.001G070600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9306689-9307688 Phaseolus vulgaris
Phvul.001G070600 2.0kb upstream 2.0kb upstream 17026 true Chr01: 9289663-9306688 Phaseolus vulgaris
Phvul.001G070600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9289663-9291662 Phaseolus vulgaris
Phvul.001G070600 2.0kb downstream 2.0kb downstream 17026 true Chr01: 9291663-9308688 Phaseolus vulgaris
Phvul.001G070600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9306689-9308688 Phaseolus vulgaris
Phvul.001G070600 5.0kb upstream 5.0kb upstream 20026 true Chr01: 9286663-9306688 Phaseolus vulgaris
Phvul.001G070600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9286663-9291662 Phaseolus vulgaris
Phvul.001G070600 5.0kb downstream 5.0kb downstream 20026 true Chr01: 9291663-9311688 Phaseolus vulgaris
Phvul.001G070600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9306689-9311688 Phaseolus vulgaris
Phvul.001G070600 10.0kb upstream 10.0kb upstream 25026 true Chr01: 9281663-9306688 Phaseolus vulgaris
Phvul.001G070600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9281663-9291662 Phaseolus vulgaris
Phvul.001G070600 10.0kb downstream 10.0kb downstream 25026 true Chr01: 9291663-9316688 Phaseolus vulgaris
Phvul.001G070600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9306689-9316688 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306389 5265 Fabidae View MSA
124067352 5270 Rosid View MSA
123739984 5271 Pentapetalae View MSA
122791325 5272 Eudicot View MSA
122043112 5273 Angiosperm View MSA
121348037 5274 Embryophyte View MSA
123425629 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05342 0.0 6.05612   Low
cufflinks 3.22373 0.0 22.3064    
cufflinks 8.20733 0.0 25.6619   High
cufflinks 1.64913 0.0 12.377   Low
cufflinks 3.33917 0.0 13.1285    
cufflinks 9.61192 0.0 41.094   High
cufflinks 5.03998 0.0 21.2629    
cufflinks 5.90282 0.0 36.746    
cufflinks 4.19393 0.0 16.2218    
cufflinks 6.41454 0.0 34.465    
cufflinks 2.89429 0.0 12.0858    

0 Strain