Gene : Phvul.001G070500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21669 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS Genomic Order:  714
Name:  ? Phvul.001G070500 Secondary Identifier:  ? PAC:37169940
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G070500 0.5kb upstream 0.5kb upstream 17823 true Chr01: 9264240-9282062 Phaseolus vulgaris
Phvul.001G070500 0.5kb upstream 0.5kb upstream 500 false Chr01: 9264240-9264739 Phaseolus vulgaris
Phvul.001G070500 0.5kb downstream 0.5kb downstream 17823 true Chr01: 9264740-9282562 Phaseolus vulgaris
Phvul.001G070500 0.5kb downstream 0.5kb downstream 500 false Chr01: 9282063-9282562 Phaseolus vulgaris
Phvul.001G070500 1.0kb upstream 1.0kb upstream 18323 true Chr01: 9263740-9282062 Phaseolus vulgaris
Phvul.001G070500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9263740-9264739 Phaseolus vulgaris
Phvul.001G070500 1.0kb downstream 1.0kb downstream 18323 true Chr01: 9264740-9283062 Phaseolus vulgaris
Phvul.001G070500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9282063-9283062 Phaseolus vulgaris
Phvul.001G070500 2.0kb upstream 2.0kb upstream 19323 true Chr01: 9262740-9282062 Phaseolus vulgaris
Phvul.001G070500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9262740-9264739 Phaseolus vulgaris
Phvul.001G070500 2.0kb downstream 2.0kb downstream 19323 true Chr01: 9264740-9284062 Phaseolus vulgaris
Phvul.001G070500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9282063-9284062 Phaseolus vulgaris
Phvul.001G070500 5.0kb upstream 5.0kb upstream 22323 true Chr01: 9259740-9282062 Phaseolus vulgaris
Phvul.001G070500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9259740-9264739 Phaseolus vulgaris
Phvul.001G070500 5.0kb downstream 5.0kb downstream 22323 true Chr01: 9264740-9287062 Phaseolus vulgaris
Phvul.001G070500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9282063-9287062 Phaseolus vulgaris
Phvul.001G070500 10.0kb upstream 10.0kb upstream 27323 true Chr01: 9254740-9282062 Phaseolus vulgaris
Phvul.001G070500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9254740-9264739 Phaseolus vulgaris
Phvul.001G070500 10.0kb downstream 10.0kb downstream 27323 true Chr01: 9264740-9292062 Phaseolus vulgaris
Phvul.001G070500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9282063-9292062 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314369 5265 Fabidae View MSA
124063112 5270 Rosid View MSA
123743839 5271 Pentapetalae View MSA
122787067 5272 Eudicot View MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.41644 0.0 7.43412   Low
cufflinks 4.02793 0.0 14.1341    
cufflinks 3.49352 0.0 12.2417    
cufflinks 0.948646 0.0 5.22619   Low
cufflinks 2.51405 0.0 9.29079    
cufflinks 5.13472 0.0 20.7147   High
cufflinks 3.15769 0.0 13.7893    
cufflinks 3.24106 0.0 16.7987    
cufflinks 2.35684 0.0 9.26087    
cufflinks 3.60169 0.0 20.5905    
cufflinks 2.77722 0.0 15.1184    

0 Strain