Gene : Phvul.001G074400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10827:SF54 - CALCIUM-BINDING EF HAND FAMILY PROTEIN Genomic Order:  750
Name:  ? Phvul.001G074400 Secondary Identifier:  ? PAC:37169262
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G074400 0.5kb upstream 0.5kb upstream 2907 true Chr01: 10161789-10164695 Phaseolus vulgaris
Phvul.001G074400 0.5kb upstream 0.5kb upstream 500 false Chr01: 10164196-10164695 Phaseolus vulgaris
Phvul.001G074400 0.5kb downstream 0.5kb downstream 2907 true Chr01: 10161289-10164195 Phaseolus vulgaris
Phvul.001G074400 0.5kb downstream 0.5kb downstream 500 false Chr01: 10161289-10161788 Phaseolus vulgaris
Phvul.001G074400 1.0kb upstream 1.0kb upstream 3407 true Chr01: 10161789-10165195 Phaseolus vulgaris
Phvul.001G074400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10164196-10165195 Phaseolus vulgaris
Phvul.001G074400 1.0kb downstream 1.0kb downstream 3407 true Chr01: 10160789-10164195 Phaseolus vulgaris
Phvul.001G074400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10160789-10161788 Phaseolus vulgaris
Phvul.001G074400 2.0kb upstream 2.0kb upstream 4407 true Chr01: 10161789-10166195 Phaseolus vulgaris
Phvul.001G074400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10164196-10166195 Phaseolus vulgaris
Phvul.001G074400 2.0kb downstream 2.0kb downstream 4407 true Chr01: 10159789-10164195 Phaseolus vulgaris
Phvul.001G074400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10159789-10161788 Phaseolus vulgaris
Phvul.001G074400 5.0kb upstream 5.0kb upstream 7407 true Chr01: 10161789-10169195 Phaseolus vulgaris
Phvul.001G074400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10164196-10169195 Phaseolus vulgaris
Phvul.001G074400 5.0kb downstream 5.0kb downstream 7407 true Chr01: 10156789-10164195 Phaseolus vulgaris
Phvul.001G074400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10156789-10161788 Phaseolus vulgaris
Phvul.001G074400 10.0kb upstream 10.0kb upstream 12407 true Chr01: 10161789-10174195 Phaseolus vulgaris
Phvul.001G074400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10164196-10174195 Phaseolus vulgaris
Phvul.001G074400 10.0kb downstream 10.0kb downstream 12407 true Chr01: 10151789-10164195 Phaseolus vulgaris
Phvul.001G074400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10151789-10161788 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300101 5265 Fabidae View MSA
124050130 5270 Rosid View MSA
123750102 5271 Pentapetalae View MSA
122788650 5272 Eudicot View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.31937 0.0 13.0923   High
cufflinks 0.0522604 0.0 0.242269 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.35282 0.0 7.72178    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0609947 0.0 0.277708 Low  
cufflinks 0.0655938 0.0 0.295428 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain