Gene : Phvul.001G076400 P. vulgaris v2.1
Defline:  (1 of 2) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  772
Name:  ? Phvul.001G076400 Secondary Identifier:  ? PAC:37168657
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUGLNSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3282 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6963 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G076400 0.5kb upstream 0.5kb upstream 13256 true Chr01: 10956972-10970227 Phaseolus vulgaris
Phvul.001G076400 0.5kb upstream 0.5kb upstream 500 false Chr01: 10969728-10970227 Phaseolus vulgaris
Phvul.001G076400 0.5kb downstream 0.5kb downstream 13256 true Chr01: 10956472-10969727 Phaseolus vulgaris
Phvul.001G076400 0.5kb downstream 0.5kb downstream 500 false Chr01: 10956472-10956971 Phaseolus vulgaris
Phvul.001G076400 1.0kb upstream 1.0kb upstream 13756 true Chr01: 10956972-10970727 Phaseolus vulgaris
Phvul.001G076400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10969728-10970727 Phaseolus vulgaris
Phvul.001G076400 1.0kb downstream 1.0kb downstream 13756 true Chr01: 10955972-10969727 Phaseolus vulgaris
Phvul.001G076400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10955972-10956971 Phaseolus vulgaris
Phvul.001G076400 2.0kb upstream 2.0kb upstream 14756 true Chr01: 10956972-10971727 Phaseolus vulgaris
Phvul.001G076400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10969728-10971727 Phaseolus vulgaris
Phvul.001G076400 2.0kb downstream 2.0kb downstream 14756 true Chr01: 10954972-10969727 Phaseolus vulgaris
Phvul.001G076400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10954972-10956971 Phaseolus vulgaris
Phvul.001G076400 5.0kb upstream 5.0kb upstream 17756 true Chr01: 10956972-10974727 Phaseolus vulgaris
Phvul.001G076400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10969728-10974727 Phaseolus vulgaris
Phvul.001G076400 5.0kb downstream 5.0kb downstream 17756 true Chr01: 10951972-10969727 Phaseolus vulgaris
Phvul.001G076400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10951972-10956971 Phaseolus vulgaris
Phvul.001G076400 10.0kb upstream 10.0kb upstream 22756 true Chr01: 10956972-10979727 Phaseolus vulgaris
Phvul.001G076400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10969728-10979727 Phaseolus vulgaris
Phvul.001G076400 10.0kb downstream 10.0kb downstream 22756 true Chr01: 10946972-10969727 Phaseolus vulgaris
Phvul.001G076400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10946972-10956971 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308491 5265 Fabidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.15023 0.0 10.7421   Low
cufflinks 17.5163 0.0 48.6679    
cufflinks 4.87726 0.0 12.607   Low
cufflinks 5.98337 0.0 15.4743   Low
cufflinks 31.7927 0.0 94.7341    
cufflinks 13.3346 0.0 36.1047    
cufflinks 60.8914 0.0 206.124 High High
cufflinks 66.6888 0.0 231.155 High High
cufflinks 32.3014 0.0 97.1105 High  
cufflinks 15.0147 0.0 41.0466    
cufflinks 42.4532 0.0 132.71 High  

0 Strain