Gene : Phvul.001G076750 P. vulgaris v2.1
Defline:  (1 of 23) PTHR10353//PTHR10353:SF81 - GLYCOSYL HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  775
Name:  ? Phvul.001G076750 Secondary Identifier:  ? PAC:37170552
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G076750 0.5kb upstream 0.5kb upstream 3388 true Chr01: 11113437-11116824 Phaseolus vulgaris
Phvul.001G076750 0.5kb upstream 0.5kb upstream 500 false Chr01: 11113437-11113936 Phaseolus vulgaris
Phvul.001G076750 0.5kb downstream 0.5kb downstream 3388 true Chr01: 11113937-11117324 Phaseolus vulgaris
Phvul.001G076750 0.5kb downstream 0.5kb downstream 500 false Chr01: 11116825-11117324 Phaseolus vulgaris
Phvul.001G076750 1.0kb upstream 1.0kb upstream 3888 true Chr01: 11112937-11116824 Phaseolus vulgaris
Phvul.001G076750 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11112937-11113936 Phaseolus vulgaris
Phvul.001G076750 1.0kb downstream 1.0kb downstream 3888 true Chr01: 11113937-11117824 Phaseolus vulgaris
Phvul.001G076750 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11116825-11117824 Phaseolus vulgaris
Phvul.001G076750 2.0kb upstream 2.0kb upstream 4888 true Chr01: 11111937-11116824 Phaseolus vulgaris
Phvul.001G076750 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11111937-11113936 Phaseolus vulgaris
Phvul.001G076750 2.0kb downstream 2.0kb downstream 4888 true Chr01: 11113937-11118824 Phaseolus vulgaris
Phvul.001G076750 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11116825-11118824 Phaseolus vulgaris
Phvul.001G076750 5.0kb upstream 5.0kb upstream 7888 true Chr01: 11108937-11116824 Phaseolus vulgaris
Phvul.001G076750 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11108937-11113936 Phaseolus vulgaris
Phvul.001G076750 5.0kb downstream 5.0kb downstream 7888 true Chr01: 11113937-11121824 Phaseolus vulgaris
Phvul.001G076750 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11116825-11121824 Phaseolus vulgaris
Phvul.001G076750 10.0kb upstream 10.0kb upstream 12888 true Chr01: 11103937-11116824 Phaseolus vulgaris
Phvul.001G076750 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11103937-11113936 Phaseolus vulgaris
Phvul.001G076750 10.0kb downstream 10.0kb downstream 12888 true Chr01: 11113937-11126824 Phaseolus vulgaris
Phvul.001G076750 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11116825-11126824 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315408 5265 Fabidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0287699 0.0 0.141019 Low  
cufflinks 0.0408964 0.0 0.193316 Low  
cufflinks 0.0247359 0.0 0.123189 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0529547 0.0 0.246052 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.028 0.0 3.66772   High
cufflinks 0.470058 0.0 1.78661   High
cufflinks 0.302273 0.0 1.19545 Low  
cufflinks 0.0626305 0.0 0.283612 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain