Gene : Phvul.001G075300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Genomic Order:  763
Name:  ? Phvul.001G075300 Secondary Identifier:  ? PAC:37169911
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G075300 0.5kb upstream 0.5kb upstream 5817 true Chr01: 10674252-10680068 Phaseolus vulgaris
Phvul.001G075300 0.5kb upstream 0.5kb upstream 500 false Chr01: 10674252-10674751 Phaseolus vulgaris
Phvul.001G075300 0.5kb downstream 0.5kb downstream 5817 true Chr01: 10674752-10680568 Phaseolus vulgaris
Phvul.001G075300 0.5kb downstream 0.5kb downstream 500 false Chr01: 10680069-10680568 Phaseolus vulgaris
Phvul.001G075300 1.0kb upstream 1.0kb upstream 6317 true Chr01: 10673752-10680068 Phaseolus vulgaris
Phvul.001G075300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10673752-10674751 Phaseolus vulgaris
Phvul.001G075300 1.0kb downstream 1.0kb downstream 6317 true Chr01: 10674752-10681068 Phaseolus vulgaris
Phvul.001G075300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10680069-10681068 Phaseolus vulgaris
Phvul.001G075300 2.0kb upstream 2.0kb upstream 7317 true Chr01: 10672752-10680068 Phaseolus vulgaris
Phvul.001G075300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10672752-10674751 Phaseolus vulgaris
Phvul.001G075300 2.0kb downstream 2.0kb downstream 7317 true Chr01: 10674752-10682068 Phaseolus vulgaris
Phvul.001G075300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10680069-10682068 Phaseolus vulgaris
Phvul.001G075300 5.0kb upstream 5.0kb upstream 10317 true Chr01: 10669752-10680068 Phaseolus vulgaris
Phvul.001G075300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10669752-10674751 Phaseolus vulgaris
Phvul.001G075300 5.0kb downstream 5.0kb downstream 10317 true Chr01: 10674752-10685068 Phaseolus vulgaris
Phvul.001G075300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10680069-10685068 Phaseolus vulgaris
Phvul.001G075300 10.0kb upstream 10.0kb upstream 15317 true Chr01: 10664752-10680068 Phaseolus vulgaris
Phvul.001G075300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10664752-10674751 Phaseolus vulgaris
Phvul.001G075300 10.0kb downstream 10.0kb downstream 15317 true Chr01: 10674752-10690068 Phaseolus vulgaris
Phvul.001G075300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10680069-10690068 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311115 5265 Fabidae View MSA
124061154 5270 Rosid View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.761297 0.0 2.6485   Low
cufflinks 5.58166 0.0 15.5435    
cufflinks 3.47246 0.0 10.1596    
cufflinks 1.84462 0.0 5.79415   Low
cufflinks 21.5124 0.0 55.6099    
cufflinks 6.58025 0.0 18.0533    
cufflinks 9.37542 0.0 24.8455    
cufflinks 5.10061 0.0 14.2504    
cufflinks 6.0344 0.0 16.5333    
cufflinks 127.478 0.0 375.746 High High
cufflinks 30.9245 0.0 80.4363   High

0 Strain