Gene : Phvul.001G064400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12801:SF51 - PROTEIN Y56A3A.33 Genomic Order:  652
Name:  ? Phvul.001G064400 Secondary Identifier:  ? PAC:37168685
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G064400 0.5kb upstream 0.5kb upstream 10752 true Chr01: 7853833-7864584 Phaseolus vulgaris
Phvul.001G064400 0.5kb upstream 0.5kb upstream 500 false Chr01: 7853833-7854332 Phaseolus vulgaris
Phvul.001G064400 0.5kb downstream 0.5kb downstream 10752 true Chr01: 7854333-7865084 Phaseolus vulgaris
Phvul.001G064400 0.5kb downstream 0.5kb downstream 500 false Chr01: 7864585-7865084 Phaseolus vulgaris
Phvul.001G064400 1.0kb upstream 1.0kb upstream 11252 true Chr01: 7853333-7864584 Phaseolus vulgaris
Phvul.001G064400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7853333-7854332 Phaseolus vulgaris
Phvul.001G064400 1.0kb downstream 1.0kb downstream 11252 true Chr01: 7854333-7865584 Phaseolus vulgaris
Phvul.001G064400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7864585-7865584 Phaseolus vulgaris
Phvul.001G064400 2.0kb upstream 2.0kb upstream 12252 true Chr01: 7852333-7864584 Phaseolus vulgaris
Phvul.001G064400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7852333-7854332 Phaseolus vulgaris
Phvul.001G064400 2.0kb downstream 2.0kb downstream 12252 true Chr01: 7854333-7866584 Phaseolus vulgaris
Phvul.001G064400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7864585-7866584 Phaseolus vulgaris
Phvul.001G064400 5.0kb upstream 5.0kb upstream 15252 true Chr01: 7849333-7864584 Phaseolus vulgaris
Phvul.001G064400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7849333-7854332 Phaseolus vulgaris
Phvul.001G064400 5.0kb downstream 5.0kb downstream 15252 true Chr01: 7854333-7869584 Phaseolus vulgaris
Phvul.001G064400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7864585-7869584 Phaseolus vulgaris
Phvul.001G064400 10.0kb upstream 10.0kb upstream 20252 true Chr01: 7844333-7864584 Phaseolus vulgaris
Phvul.001G064400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7844333-7854332 Phaseolus vulgaris
Phvul.001G064400 10.0kb downstream 10.0kb downstream 20252 true Chr01: 7854333-7874584 Phaseolus vulgaris
Phvul.001G064400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7864585-7874584 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303555 5265 Fabidae View MSA
124062252 5270 Rosid View MSA
123736446 5271 Pentapetalae View MSA
122787363 5272 Eudicot View MSA
122044600 5273 Angiosperm View MSA
121347070 5274 Embryophyte View MSA
123425683 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.85246 0.0 13.8554    
cufflinks 4.86265 0.0 13.9032    
cufflinks 4.12644 0.0 11.9178    
cufflinks 2.61566 0.0 8.09549   Low
cufflinks 2.56433 0.0 7.94897   Low
cufflinks 3.29774 0.0 9.81842    
cufflinks 4.59374 0.0 13.2418    
cufflinks 5.79563 0.0 16.241   High
cufflinks 3.42269 0.0 10.2081    
cufflinks 6.43104 0.0 17.9274   High
cufflinks 2.39858 0.0 7.48624   Low

0 Strain