Gene : Phvul.001G064700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  655
Name:  ? Phvul.001G064700 Secondary Identifier:  ? PAC:37169182
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G064700 0.5kb upstream 0.5kb upstream 1916 true Chr01: 7936214-7938129 Phaseolus vulgaris
Phvul.001G064700 0.5kb upstream 0.5kb upstream 500 false Chr01: 7936214-7936713 Phaseolus vulgaris
Phvul.001G064700 0.5kb downstream 0.5kb downstream 1916 true Chr01: 7936714-7938629 Phaseolus vulgaris
Phvul.001G064700 0.5kb downstream 0.5kb downstream 500 false Chr01: 7938130-7938629 Phaseolus vulgaris
Phvul.001G064700 1.0kb upstream 1.0kb upstream 2416 true Chr01: 7935714-7938129 Phaseolus vulgaris
Phvul.001G064700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7935714-7936713 Phaseolus vulgaris
Phvul.001G064700 1.0kb downstream 1.0kb downstream 2416 true Chr01: 7936714-7939129 Phaseolus vulgaris
Phvul.001G064700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7938130-7939129 Phaseolus vulgaris
Phvul.001G064700 2.0kb upstream 2.0kb upstream 3416 true Chr01: 7934714-7938129 Phaseolus vulgaris
Phvul.001G064700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7934714-7936713 Phaseolus vulgaris
Phvul.001G064700 2.0kb downstream 2.0kb downstream 3416 true Chr01: 7936714-7940129 Phaseolus vulgaris
Phvul.001G064700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7938130-7940129 Phaseolus vulgaris
Phvul.001G064700 5.0kb upstream 5.0kb upstream 6416 true Chr01: 7931714-7938129 Phaseolus vulgaris
Phvul.001G064700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7931714-7936713 Phaseolus vulgaris
Phvul.001G064700 5.0kb downstream 5.0kb downstream 6416 true Chr01: 7936714-7943129 Phaseolus vulgaris
Phvul.001G064700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7938130-7943129 Phaseolus vulgaris
Phvul.001G064700 10.0kb upstream 10.0kb upstream 11416 true Chr01: 7926714-7938129 Phaseolus vulgaris
Phvul.001G064700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7926714-7936713 Phaseolus vulgaris
Phvul.001G064700 10.0kb downstream 10.0kb downstream 11416 true Chr01: 7936714-7948129 Phaseolus vulgaris
Phvul.001G064700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7938130-7948129 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312015 5265 Fabidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.8398 0.0 256.097 High High
cufflinks 25.4065 0.0 66.4331    
cufflinks 5.29684 0.0 15.872   Low
cufflinks 29.7157 0.0 77.3903    
cufflinks 7.42309 0.0 21.5084    
cufflinks 18.9696 0.0 50.5361    
cufflinks 12.635 0.0 34.7987    
cufflinks 8.53496 0.0 24.3121    
cufflinks 5.0516 0.0 15.3642   Low
cufflinks 46.4751 0.0 120.193 High High
cufflinks 19.6633 0.0 52.2889    

0 Strain