Gene : Phvul.001G057400 P. vulgaris v2.1
Defline:  (1 of 1) K15902 - EKC/KEOPS complex subunit PCC1/LAGE3 (PCC1, LAGE3) Genomic Order:  581
Name:  ? Phvul.001G057400 Secondary Identifier:  ? PAC:37168713
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G057400 0.5kb upstream 0.5kb upstream 5392 true Chr01: 6514750-6520141 Phaseolus vulgaris
Phvul.001G057400 0.5kb upstream 0.5kb upstream 500 false Chr01: 6514750-6515249 Phaseolus vulgaris
Phvul.001G057400 0.5kb downstream 0.5kb downstream 5392 true Chr01: 6515250-6520641 Phaseolus vulgaris
Phvul.001G057400 0.5kb downstream 0.5kb downstream 500 false Chr01: 6520142-6520641 Phaseolus vulgaris
Phvul.001G057400 1.0kb upstream 1.0kb upstream 5892 true Chr01: 6514250-6520141 Phaseolus vulgaris
Phvul.001G057400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6514250-6515249 Phaseolus vulgaris
Phvul.001G057400 1.0kb downstream 1.0kb downstream 5892 true Chr01: 6515250-6521141 Phaseolus vulgaris
Phvul.001G057400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6520142-6521141 Phaseolus vulgaris
Phvul.001G057400 2.0kb upstream 2.0kb upstream 6892 true Chr01: 6513250-6520141 Phaseolus vulgaris
Phvul.001G057400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6513250-6515249 Phaseolus vulgaris
Phvul.001G057400 2.0kb downstream 2.0kb downstream 6892 true Chr01: 6515250-6522141 Phaseolus vulgaris
Phvul.001G057400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6520142-6522141 Phaseolus vulgaris
Phvul.001G057400 5.0kb upstream 5.0kb upstream 9892 true Chr01: 6510250-6520141 Phaseolus vulgaris
Phvul.001G057400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6510250-6515249 Phaseolus vulgaris
Phvul.001G057400 5.0kb downstream 5.0kb downstream 9892 true Chr01: 6515250-6525141 Phaseolus vulgaris
Phvul.001G057400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6520142-6525141 Phaseolus vulgaris
Phvul.001G057400 10.0kb upstream 10.0kb upstream 14892 true Chr01: 6505250-6520141 Phaseolus vulgaris
Phvul.001G057400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6505250-6515249 Phaseolus vulgaris
Phvul.001G057400 10.0kb downstream 10.0kb downstream 14892 true Chr01: 6515250-6530141 Phaseolus vulgaris
Phvul.001G057400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6520142-6530141 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311807 5265 Fabidae View MSA
124050256 5270 Rosid View MSA
123736925 5271 Pentapetalae View MSA
122787092 5272 Eudicot View MSA
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8065 0.0 54.9438    
cufflinks 12.3592 0.0 39.0855    
cufflinks 12.486 0.0 46.0299    
cufflinks 17.8665 0.0 63.7062   High
cufflinks 11.2719 0.0 36.6774    
cufflinks 9.73897 0.0 32.1303    
cufflinks 10.3894 0.0 40.4345    
cufflinks 13.3015 0.0 48.1191    
cufflinks 11.1707 0.0 36.381    
cufflinks 4.77534 0.0 18.8044   Low
cufflinks 10.5789 0.0 34.7714    

0 Strain