Gene : Phvul.001G058000 P. vulgaris v2.1
Defline:  (1 of 12) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  587
Name:  ? Phvul.001G058000 Secondary Identifier:  ? PAC:37170685
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G058000 0.5kb upstream 0.5kb upstream 3842 true Chr01: 6576185-6580026 Phaseolus vulgaris
Phvul.001G058000 0.5kb upstream 0.5kb upstream 500 false Chr01: 6576185-6576684 Phaseolus vulgaris
Phvul.001G058000 0.5kb downstream 0.5kb downstream 3842 true Chr01: 6576685-6580526 Phaseolus vulgaris
Phvul.001G058000 0.5kb downstream 0.5kb downstream 500 false Chr01: 6580027-6580526 Phaseolus vulgaris
Phvul.001G058000 1.0kb upstream 1.0kb upstream 4342 true Chr01: 6575685-6580026 Phaseolus vulgaris
Phvul.001G058000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6575685-6576684 Phaseolus vulgaris
Phvul.001G058000 1.0kb downstream 1.0kb downstream 4342 true Chr01: 6576685-6581026 Phaseolus vulgaris
Phvul.001G058000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6580027-6581026 Phaseolus vulgaris
Phvul.001G058000 2.0kb upstream 2.0kb upstream 5342 true Chr01: 6574685-6580026 Phaseolus vulgaris
Phvul.001G058000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6574685-6576684 Phaseolus vulgaris
Phvul.001G058000 2.0kb downstream 2.0kb downstream 5342 true Chr01: 6576685-6582026 Phaseolus vulgaris
Phvul.001G058000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6580027-6582026 Phaseolus vulgaris
Phvul.001G058000 5.0kb upstream 5.0kb upstream 8342 true Chr01: 6571685-6580026 Phaseolus vulgaris
Phvul.001G058000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6571685-6576684 Phaseolus vulgaris
Phvul.001G058000 5.0kb downstream 5.0kb downstream 8342 true Chr01: 6576685-6585026 Phaseolus vulgaris
Phvul.001G058000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6580027-6585026 Phaseolus vulgaris
Phvul.001G058000 10.0kb upstream 10.0kb upstream 13342 true Chr01: 6566685-6580026 Phaseolus vulgaris
Phvul.001G058000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6566685-6576684 Phaseolus vulgaris
Phvul.001G058000 10.0kb downstream 10.0kb downstream 13342 true Chr01: 6576685-6590026 Phaseolus vulgaris
Phvul.001G058000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6580027-6590026 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308234 5265 Fabidae View MSA
124060724 5270 Rosid View MSA
123739839 5271 Pentapetalae View MSA
122789200 5272 Eudicot View MSA
122042948 5273 Angiosperm View MSA
121347076 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.4743 0.0 239.89 High  
cufflinks 83.2185 0.0 217.257 High  
cufflinks 382.164 0.0 1165.2 High High
cufflinks 43.5072 0.0 112.721 High  
cufflinks 49.501 0.0 128.022 High  
cufflinks 105.446 0.0 278.843 High  
cufflinks 1.79322 0.0 6.24027   Low
cufflinks 2.58374 0.0 8.62456   Low
cufflinks 2.61254 0.0 8.73539   Low
cufflinks 49.4479 0.0 127.832 High  
cufflinks 36.767 0.0 95.6187 High  

0 Strain