Gene : Phvul.001G059700 P. vulgaris v2.1
Genomic Order:  605 Name:  ? Phvul.001G059700
Secondary Identifier:  ? PAC:37168924
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G059700 0.5kb upstream 0.5kb upstream 1727 true Chr01: 6903623-6905349 Phaseolus vulgaris
Phvul.001G059700 0.5kb upstream 0.5kb upstream 500 false Chr01: 6903623-6904122 Phaseolus vulgaris
Phvul.001G059700 0.5kb downstream 0.5kb downstream 1727 true Chr01: 6904123-6905849 Phaseolus vulgaris
Phvul.001G059700 0.5kb downstream 0.5kb downstream 500 false Chr01: 6905350-6905849 Phaseolus vulgaris
Phvul.001G059700 1.0kb upstream 1.0kb upstream 2227 true Chr01: 6903123-6905349 Phaseolus vulgaris
Phvul.001G059700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6903123-6904122 Phaseolus vulgaris
Phvul.001G059700 1.0kb downstream 1.0kb downstream 2227 true Chr01: 6904123-6906349 Phaseolus vulgaris
Phvul.001G059700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6905350-6906349 Phaseolus vulgaris
Phvul.001G059700 2.0kb upstream 2.0kb upstream 3227 true Chr01: 6902123-6905349 Phaseolus vulgaris
Phvul.001G059700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6902123-6904122 Phaseolus vulgaris
Phvul.001G059700 2.0kb downstream 2.0kb downstream 3227 true Chr01: 6904123-6907349 Phaseolus vulgaris
Phvul.001G059700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6905350-6907349 Phaseolus vulgaris
Phvul.001G059700 5.0kb upstream 5.0kb upstream 6227 true Chr01: 6899123-6905349 Phaseolus vulgaris
Phvul.001G059700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6899123-6904122 Phaseolus vulgaris
Phvul.001G059700 5.0kb downstream 5.0kb downstream 6227 true Chr01: 6904123-6910349 Phaseolus vulgaris
Phvul.001G059700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6905350-6910349 Phaseolus vulgaris
Phvul.001G059700 10.0kb upstream 10.0kb upstream 11227 true Chr01: 6894123-6905349 Phaseolus vulgaris
Phvul.001G059700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6894123-6904122 Phaseolus vulgaris
Phvul.001G059700 10.0kb downstream 10.0kb downstream 11227 true Chr01: 6904123-6915349 Phaseolus vulgaris
Phvul.001G059700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6905350-6915349 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313068 5265 Fabidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.3708 0.0 92.3134 High High
cufflinks 15.3733 0.0 42.9824    
cufflinks 17.622 0.0 48.6275    
cufflinks 5.75858 0.0 17.7679   Low
cufflinks 22.1407 0.0 59.9773    
cufflinks 4.2721 0.0 13.7568   Low
cufflinks 17.0594 0.0 47.0412    
cufflinks 14.8585 0.0 41.5301    
cufflinks 13.6248 0.0 38.3433    
cufflinks 60.7071 0.0 156.917 High High
cufflinks 21.2065 0.0 57.6537    

0 Strain