Gene : Phvul.001G050200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31096:SF21 - ACT DOMAIN-CONTAINING PROTEIN Genomic Order:  506
Name:  ? Phvul.001G050200 Secondary Identifier:  ? PAC:37169981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G050200 0.5kb upstream 0.5kb upstream 2709 true Chr01: 5403083-5405791 Phaseolus vulgaris
Phvul.001G050200 0.5kb upstream 0.5kb upstream 500 false Chr01: 5405292-5405791 Phaseolus vulgaris
Phvul.001G050200 0.5kb downstream 0.5kb downstream 2709 true Chr01: 5402583-5405291 Phaseolus vulgaris
Phvul.001G050200 0.5kb downstream 0.5kb downstream 500 false Chr01: 5402583-5403082 Phaseolus vulgaris
Phvul.001G050200 1.0kb upstream 1.0kb upstream 3209 true Chr01: 5403083-5406291 Phaseolus vulgaris
Phvul.001G050200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5405292-5406291 Phaseolus vulgaris
Phvul.001G050200 1.0kb downstream 1.0kb downstream 3209 true Chr01: 5402083-5405291 Phaseolus vulgaris
Phvul.001G050200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5402083-5403082 Phaseolus vulgaris
Phvul.001G050200 2.0kb upstream 2.0kb upstream 4209 true Chr01: 5403083-5407291 Phaseolus vulgaris
Phvul.001G050200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5405292-5407291 Phaseolus vulgaris
Phvul.001G050200 2.0kb downstream 2.0kb downstream 4209 true Chr01: 5401083-5405291 Phaseolus vulgaris
Phvul.001G050200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5401083-5403082 Phaseolus vulgaris
Phvul.001G050200 5.0kb upstream 5.0kb upstream 7209 true Chr01: 5403083-5410291 Phaseolus vulgaris
Phvul.001G050200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5405292-5410291 Phaseolus vulgaris
Phvul.001G050200 5.0kb downstream 5.0kb downstream 7209 true Chr01: 5398083-5405291 Phaseolus vulgaris
Phvul.001G050200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5398083-5403082 Phaseolus vulgaris
Phvul.001G050200 10.0kb upstream 10.0kb upstream 12209 true Chr01: 5403083-5415291 Phaseolus vulgaris
Phvul.001G050200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5405292-5415291 Phaseolus vulgaris
Phvul.001G050200 10.0kb downstream 10.0kb downstream 12209 true Chr01: 5393083-5405291 Phaseolus vulgaris
Phvul.001G050200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5393083-5403082 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026657 5273 Angiosperm View MSA
122310506 5265 Fabidae View MSA
124068952 5270 Rosid View MSA
123740265 5271 Pentapetalae View MSA
122790805 5272 Eudicot View MSA
121296457 5274 Embryophyte View MSA
123334616 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.220661 0.0 0.894096 Low High
cufflinks 0.0766354 0.0 0.341066 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0511593 0.0 0.237642 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain