Gene : Phvul.001G049400 P. vulgaris v2.1
Genomic Order:  498 Name:  ? Phvul.001G049400
Secondary Identifier:  ? PAC:37170181
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G049400 0.5kb upstream 0.5kb upstream 1094 true Chr01: 5323528-5324621 Phaseolus vulgaris
Phvul.001G049400 0.5kb upstream 0.5kb upstream 500 false Chr01: 5323528-5324027 Phaseolus vulgaris
Phvul.001G049400 0.5kb downstream 0.5kb downstream 1094 true Chr01: 5324028-5325121 Phaseolus vulgaris
Phvul.001G049400 0.5kb downstream 0.5kb downstream 500 false Chr01: 5324622-5325121 Phaseolus vulgaris
Phvul.001G049400 1.0kb upstream 1.0kb upstream 1594 true Chr01: 5323028-5324621 Phaseolus vulgaris
Phvul.001G049400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5323028-5324027 Phaseolus vulgaris
Phvul.001G049400 1.0kb downstream 1.0kb downstream 1594 true Chr01: 5324028-5325621 Phaseolus vulgaris
Phvul.001G049400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5324622-5325621 Phaseolus vulgaris
Phvul.001G049400 2.0kb upstream 2.0kb upstream 2594 true Chr01: 5322028-5324621 Phaseolus vulgaris
Phvul.001G049400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5322028-5324027 Phaseolus vulgaris
Phvul.001G049400 2.0kb downstream 2.0kb downstream 2594 true Chr01: 5324028-5326621 Phaseolus vulgaris
Phvul.001G049400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5324622-5326621 Phaseolus vulgaris
Phvul.001G049400 5.0kb upstream 5.0kb upstream 5594 true Chr01: 5319028-5324621 Phaseolus vulgaris
Phvul.001G049400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5319028-5324027 Phaseolus vulgaris
Phvul.001G049400 5.0kb downstream 5.0kb downstream 5594 true Chr01: 5324028-5329621 Phaseolus vulgaris
Phvul.001G049400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5324622-5329621 Phaseolus vulgaris
Phvul.001G049400 10.0kb upstream 10.0kb upstream 10594 true Chr01: 5314028-5324621 Phaseolus vulgaris
Phvul.001G049400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5314028-5324027 Phaseolus vulgaris
Phvul.001G049400 10.0kb downstream 10.0kb downstream 10594 true Chr01: 5324028-5334621 Phaseolus vulgaris
Phvul.001G049400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5324622-5334621 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298903 5265 Fabidae View MSA
124073291 5270 Rosid View MSA
123746276 5271 Pentapetalae View MSA
122792590 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.6206 0.0 82.1086    
cufflinks 25.2448 0.0 71.2386    
cufflinks 31.4369 0.0 87.5277    
cufflinks 42.5468 0.0 113.013 High  
cufflinks 100.541 0.0 259.884 High High
cufflinks 19.3693 0.0 56.401   Low
cufflinks 70.3363 0.0 183.054 High  
cufflinks 38.7661 0.0 105.715 High  
cufflinks 115.805 0.0 299.565 High High
cufflinks 154.702 0.0 401.579 High High
cufflinks 41.9878 0.0 112.612 High  

0 Strain