Gene : Phvul.001G049700 P. vulgaris v2.1
Defline:  (1 of 1) K06990 - uncharacterized protein (K06990) Genomic Order:  501
Name:  ? Phvul.001G049700 Secondary Identifier:  ? PAC:37169453
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G049700 0.5kb upstream 0.5kb upstream 5189 true Chr01: 5340915-5346103 Phaseolus vulgaris
Phvul.001G049700 0.5kb upstream 0.5kb upstream 500 false Chr01: 5340915-5341414 Phaseolus vulgaris
Phvul.001G049700 0.5kb downstream 0.5kb downstream 5189 true Chr01: 5341415-5346603 Phaseolus vulgaris
Phvul.001G049700 0.5kb downstream 0.5kb downstream 500 false Chr01: 5346104-5346603 Phaseolus vulgaris
Phvul.001G049700 1.0kb upstream 1.0kb upstream 5689 true Chr01: 5340415-5346103 Phaseolus vulgaris
Phvul.001G049700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5340415-5341414 Phaseolus vulgaris
Phvul.001G049700 1.0kb downstream 1.0kb downstream 5689 true Chr01: 5341415-5347103 Phaseolus vulgaris
Phvul.001G049700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5346104-5347103 Phaseolus vulgaris
Phvul.001G049700 2.0kb upstream 2.0kb upstream 6689 true Chr01: 5339415-5346103 Phaseolus vulgaris
Phvul.001G049700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5339415-5341414 Phaseolus vulgaris
Phvul.001G049700 2.0kb downstream 2.0kb downstream 6689 true Chr01: 5341415-5348103 Phaseolus vulgaris
Phvul.001G049700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5346104-5348103 Phaseolus vulgaris
Phvul.001G049700 5.0kb upstream 5.0kb upstream 9689 true Chr01: 5336415-5346103 Phaseolus vulgaris
Phvul.001G049700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5336415-5341414 Phaseolus vulgaris
Phvul.001G049700 5.0kb downstream 5.0kb downstream 9689 true Chr01: 5341415-5351103 Phaseolus vulgaris
Phvul.001G049700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5346104-5351103 Phaseolus vulgaris
Phvul.001G049700 10.0kb upstream 10.0kb upstream 14689 true Chr01: 5331415-5346103 Phaseolus vulgaris
Phvul.001G049700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5331415-5341414 Phaseolus vulgaris
Phvul.001G049700 10.0kb downstream 10.0kb downstream 14689 true Chr01: 5341415-5356103 Phaseolus vulgaris
Phvul.001G049700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5346104-5356103 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304442 5265 Fabidae View MSA
124061340 5270 Rosid View MSA
123739302 5271 Pentapetalae View MSA
122792627 5272 Eudicot View MSA
122043958 5273 Angiosperm View MSA
121344189 5274 Embryophyte View MSA
123424633 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.4879 0.0 107.363 High High
cufflinks 21.8786 0.0 57.1721    
cufflinks 17.3857 0.0 45.9173   Low
cufflinks 31.4481 0.0 81.41   High
cufflinks 20.4206 0.0 53.7791    
cufflinks 18.8605 0.0 49.6571   Low
cufflinks 24.7652 0.0 64.4363    
cufflinks 26.3554 0.0 68.3538    
cufflinks 24.2953 0.0 63.299    
cufflinks 22.4532 0.0 58.649    
cufflinks 25.2895 0.0 65.8609    

0 Strain