Gene : Phvul.001G051900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12169:SF5 - AFG1-LIKE ATPASE FAMILY PROTEIN Genomic Order:  524
Name:  ? Phvul.001G051900 Secondary Identifier:  ? PAC:37170518
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G051900 0.5kb upstream 0.5kb upstream 20713 true Chr01: 5651667-5672379 Phaseolus vulgaris
Phvul.001G051900 0.5kb upstream 0.5kb upstream 500 false Chr01: 5651667-5652166 Phaseolus vulgaris
Phvul.001G051900 0.5kb downstream 0.5kb downstream 20713 true Chr01: 5652167-5672879 Phaseolus vulgaris
Phvul.001G051900 0.5kb downstream 0.5kb downstream 500 false Chr01: 5672380-5672879 Phaseolus vulgaris
Phvul.001G051900 1.0kb upstream 1.0kb upstream 21213 true Chr01: 5651167-5672379 Phaseolus vulgaris
Phvul.001G051900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5651167-5652166 Phaseolus vulgaris
Phvul.001G051900 1.0kb downstream 1.0kb downstream 21213 true Chr01: 5652167-5673379 Phaseolus vulgaris
Phvul.001G051900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5672380-5673379 Phaseolus vulgaris
Phvul.001G051900 2.0kb upstream 2.0kb upstream 22213 true Chr01: 5650167-5672379 Phaseolus vulgaris
Phvul.001G051900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5650167-5652166 Phaseolus vulgaris
Phvul.001G051900 2.0kb downstream 2.0kb downstream 22213 true Chr01: 5652167-5674379 Phaseolus vulgaris
Phvul.001G051900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5672380-5674379 Phaseolus vulgaris
Phvul.001G051900 5.0kb upstream 5.0kb upstream 25213 true Chr01: 5647167-5672379 Phaseolus vulgaris
Phvul.001G051900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5647167-5652166 Phaseolus vulgaris
Phvul.001G051900 5.0kb downstream 5.0kb downstream 25213 true Chr01: 5652167-5677379 Phaseolus vulgaris
Phvul.001G051900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5672380-5677379 Phaseolus vulgaris
Phvul.001G051900 10.0kb upstream 10.0kb upstream 30213 true Chr01: 5642167-5672379 Phaseolus vulgaris
Phvul.001G051900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5642167-5652166 Phaseolus vulgaris
Phvul.001G051900 10.0kb downstream 10.0kb downstream 30213 true Chr01: 5652167-5682379 Phaseolus vulgaris
Phvul.001G051900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5672380-5682379 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306936 5265 Fabidae View MSA
124069406 5270 Rosid View MSA
123741910 5271 Pentapetalae View MSA
122794627 5272 Eudicot View MSA
122048281 5273 Angiosperm View MSA
121348170 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.4305 0.0 17.6247    
cufflinks 2.79496 0.0 8.32882    
cufflinks 5.19189 0.0 14.4804    
cufflinks 9.43671 0.0 25.2415   High
cufflinks 2.81801 0.0 8.46601    
cufflinks 5.70326 0.0 15.7878    
cufflinks 1.83697 0.0 5.73359   Low
cufflinks 2.17475 0.0 6.62768    
cufflinks 1.31943 0.0 4.28828   Low
cufflinks 5.126 0.0 14.3679    
cufflinks 4.38634 0.0 12.4957    

0 Strain