Gene : Phvul.001G052000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24089:SF348 - ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  525
Name:  ? Phvul.001G052000 Secondary Identifier:  ? PAC:37168138
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G052000 0.5kb upstream 0.5kb upstream 3763 true Chr01: 5680185-5683947 Phaseolus vulgaris
Phvul.001G052000 0.5kb upstream 0.5kb upstream 500 false Chr01: 5680185-5680684 Phaseolus vulgaris
Phvul.001G052000 0.5kb downstream 0.5kb downstream 3763 true Chr01: 5680685-5684447 Phaseolus vulgaris
Phvul.001G052000 0.5kb downstream 0.5kb downstream 500 false Chr01: 5683948-5684447 Phaseolus vulgaris
Phvul.001G052000 1.0kb upstream 1.0kb upstream 4263 true Chr01: 5679685-5683947 Phaseolus vulgaris
Phvul.001G052000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5679685-5680684 Phaseolus vulgaris
Phvul.001G052000 1.0kb downstream 1.0kb downstream 4263 true Chr01: 5680685-5684947 Phaseolus vulgaris
Phvul.001G052000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5683948-5684947 Phaseolus vulgaris
Phvul.001G052000 2.0kb upstream 2.0kb upstream 5263 true Chr01: 5678685-5683947 Phaseolus vulgaris
Phvul.001G052000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5678685-5680684 Phaseolus vulgaris
Phvul.001G052000 2.0kb downstream 2.0kb downstream 5263 true Chr01: 5680685-5685947 Phaseolus vulgaris
Phvul.001G052000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5683948-5685947 Phaseolus vulgaris
Phvul.001G052000 5.0kb upstream 5.0kb upstream 8263 true Chr01: 5675685-5683947 Phaseolus vulgaris
Phvul.001G052000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5675685-5680684 Phaseolus vulgaris
Phvul.001G052000 5.0kb downstream 5.0kb downstream 8263 true Chr01: 5680685-5688947 Phaseolus vulgaris
Phvul.001G052000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5683948-5688947 Phaseolus vulgaris
Phvul.001G052000 10.0kb upstream 10.0kb upstream 13263 true Chr01: 5670685-5683947 Phaseolus vulgaris
Phvul.001G052000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5670685-5680684 Phaseolus vulgaris
Phvul.001G052000 10.0kb downstream 10.0kb downstream 13263 true Chr01: 5680685-5693947 Phaseolus vulgaris
Phvul.001G052000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5683948-5693947 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309358 5265 Fabidae View MSA
124068295 5270 Rosid View MSA
123752279 5271 Pentapetalae View MSA
122788365 5272 Eudicot View MSA
122044807 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121350048 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.64743 0.0 20.8196    
cufflinks 9.54466 0.0 25.564    
cufflinks 8.70463 0.0 23.4816    
cufflinks 11.2443 0.0 29.9606    
cufflinks 10.0787 0.0 26.9752    
cufflinks 5.64188 0.0 15.7967   Low
cufflinks 11.0153 0.0 29.1556    
cufflinks 11.4795 0.0 30.2583    
cufflinks 16.5825 0.0 43.0808   High
cufflinks 7.3596 0.0 20.142    
cufflinks 11.216 0.0 29.7428    

0 Strain