Gene : Phvul.001G053900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13789//PTHR13789:SF213 - MONOOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  546
Name:  ? Phvul.001G053900 Secondary Identifier:  ? PAC:37167938
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G053900 0.5kb upstream 0.5kb upstream 2728 true Chr01: 5984854-5987581 Phaseolus vulgaris
Phvul.001G053900 0.5kb upstream 0.5kb upstream 500 false Chr01: 5984854-5985353 Phaseolus vulgaris
Phvul.001G053900 0.5kb downstream 0.5kb downstream 2728 true Chr01: 5985354-5988081 Phaseolus vulgaris
Phvul.001G053900 0.5kb downstream 0.5kb downstream 500 false Chr01: 5987582-5988081 Phaseolus vulgaris
Phvul.001G053900 1.0kb upstream 1.0kb upstream 3228 true Chr01: 5984354-5987581 Phaseolus vulgaris
Phvul.001G053900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5984354-5985353 Phaseolus vulgaris
Phvul.001G053900 1.0kb downstream 1.0kb downstream 3228 true Chr01: 5985354-5988581 Phaseolus vulgaris
Phvul.001G053900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5987582-5988581 Phaseolus vulgaris
Phvul.001G053900 2.0kb upstream 2.0kb upstream 4228 true Chr01: 5983354-5987581 Phaseolus vulgaris
Phvul.001G053900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5983354-5985353 Phaseolus vulgaris
Phvul.001G053900 2.0kb downstream 2.0kb downstream 4228 true Chr01: 5985354-5989581 Phaseolus vulgaris
Phvul.001G053900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5987582-5989581 Phaseolus vulgaris
Phvul.001G053900 5.0kb upstream 5.0kb upstream 7228 true Chr01: 5980354-5987581 Phaseolus vulgaris
Phvul.001G053900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5980354-5985353 Phaseolus vulgaris
Phvul.001G053900 5.0kb downstream 5.0kb downstream 7228 true Chr01: 5985354-5992581 Phaseolus vulgaris
Phvul.001G053900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5987582-5992581 Phaseolus vulgaris
Phvul.001G053900 10.0kb upstream 10.0kb upstream 12228 true Chr01: 5975354-5987581 Phaseolus vulgaris
Phvul.001G053900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5975354-5985353 Phaseolus vulgaris
Phvul.001G053900 10.0kb downstream 10.0kb downstream 12228 true Chr01: 5985354-5997581 Phaseolus vulgaris
Phvul.001G053900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5987582-5997581 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304093 5265 Fabidae View MSA
124061174 5270 Rosid View MSA
123737316 5271 Pentapetalae View MSA
122788281 5272 Eudicot View MSA
122045559 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121345627 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43208 0.0 4.81677    
cufflinks 1.08522 0.0 3.75935   Low
cufflinks 3.93362 0.0 11.7276   High
cufflinks 2.82373 0.0 8.85082    
cufflinks 1.62759 0.0 5.42831    
cufflinks 2.7345 0.0 8.53285    
cufflinks 2.03487 0.0 6.55064    
cufflinks 0.836236 0.0 2.95982   Low
cufflinks 3.4657 0.0 10.5229   High
cufflinks 2.49285 0.0 7.88966    
cufflinks 1.69079 0.0 5.60631    

0 Strain