Gene : Phvul.001G053000 P. vulgaris v2.1
Defline:  (1 of 1) KOG0865//KOG0879 - Cyclophilin type peptidyl-prolyl cis-trans isomerase // U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase Genomic Order:  536
Name:  ? Phvul.001G053000 Secondary Identifier:  ? PAC:37169398
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G053000 0.5kb upstream 0.5kb upstream 7674 true Chr01: 5830434-5838107 Phaseolus vulgaris
Phvul.001G053000 0.5kb upstream 0.5kb upstream 500 false Chr01: 5837608-5838107 Phaseolus vulgaris
Phvul.001G053000 0.5kb downstream 0.5kb downstream 7674 true Chr01: 5829934-5837607 Phaseolus vulgaris
Phvul.001G053000 0.5kb downstream 0.5kb downstream 500 false Chr01: 5829934-5830433 Phaseolus vulgaris
Phvul.001G053000 1.0kb upstream 1.0kb upstream 8174 true Chr01: 5830434-5838607 Phaseolus vulgaris
Phvul.001G053000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5837608-5838607 Phaseolus vulgaris
Phvul.001G053000 1.0kb downstream 1.0kb downstream 8174 true Chr01: 5829434-5837607 Phaseolus vulgaris
Phvul.001G053000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5829434-5830433 Phaseolus vulgaris
Phvul.001G053000 2.0kb upstream 2.0kb upstream 9174 true Chr01: 5830434-5839607 Phaseolus vulgaris
Phvul.001G053000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5837608-5839607 Phaseolus vulgaris
Phvul.001G053000 2.0kb downstream 2.0kb downstream 9174 true Chr01: 5828434-5837607 Phaseolus vulgaris
Phvul.001G053000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5828434-5830433 Phaseolus vulgaris
Phvul.001G053000 5.0kb upstream 5.0kb upstream 12174 true Chr01: 5830434-5842607 Phaseolus vulgaris
Phvul.001G053000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5837608-5842607 Phaseolus vulgaris
Phvul.001G053000 5.0kb downstream 5.0kb downstream 12174 true Chr01: 5825434-5837607 Phaseolus vulgaris
Phvul.001G053000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5825434-5830433 Phaseolus vulgaris
Phvul.001G053000 10.0kb upstream 10.0kb upstream 17174 true Chr01: 5830434-5847607 Phaseolus vulgaris
Phvul.001G053000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5837608-5847607 Phaseolus vulgaris
Phvul.001G053000 10.0kb downstream 10.0kb downstream 17174 true Chr01: 5820434-5837607 Phaseolus vulgaris
Phvul.001G053000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5820434-5830433 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040927 5273 Angiosperm View MSA
122315223 5265 Fabidae View MSA
124061433 5270 Rosid View MSA
123740248 5271 Pentapetalae View MSA
122791283 5272 Eudicot View MSA
123428973 5275 Viridiplantae View MSA
121347265 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.05429 0.0 18.4155   Low
cufflinks 21.5311 0.0 56.7532    
cufflinks 19.0515 0.0 49.9282    
cufflinks 8.41714 0.0 21.8789   Low
cufflinks 20.2074 0.0 52.9131    
cufflinks 22.447 0.0 59.3793    
cufflinks 22.5214 0.0 59.854    
cufflinks 20.2821 0.0 53.5433    
cufflinks 22.6194 0.0 60.0391    
cufflinks 29.8058 0.0 80.4372   High
cufflinks 18.6818 0.0 48.8404    

0 Strain