Gene : Phvul.001G055500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10257:SF25 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 57 KDA REGULATORY SUBUNIT B' IOTA ISOFORM Genomic Order:  562
Name:  ? Phvul.001G055500 Secondary Identifier:  ? PAC:37170883
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G055500 0.5kb upstream 0.5kb upstream 3506 true Chr01: 6258121-6261626 Phaseolus vulgaris
Phvul.001G055500 0.5kb upstream 0.5kb upstream 500 false Chr01: 6261127-6261626 Phaseolus vulgaris
Phvul.001G055500 0.5kb downstream 0.5kb downstream 3506 true Chr01: 6257621-6261126 Phaseolus vulgaris
Phvul.001G055500 0.5kb downstream 0.5kb downstream 500 false Chr01: 6257621-6258120 Phaseolus vulgaris
Phvul.001G055500 1.0kb upstream 1.0kb upstream 4006 true Chr01: 6258121-6262126 Phaseolus vulgaris
Phvul.001G055500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6261127-6262126 Phaseolus vulgaris
Phvul.001G055500 1.0kb downstream 1.0kb downstream 4006 true Chr01: 6257121-6261126 Phaseolus vulgaris
Phvul.001G055500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6257121-6258120 Phaseolus vulgaris
Phvul.001G055500 2.0kb upstream 2.0kb upstream 5006 true Chr01: 6258121-6263126 Phaseolus vulgaris
Phvul.001G055500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6261127-6263126 Phaseolus vulgaris
Phvul.001G055500 2.0kb downstream 2.0kb downstream 5006 true Chr01: 6256121-6261126 Phaseolus vulgaris
Phvul.001G055500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6256121-6258120 Phaseolus vulgaris
Phvul.001G055500 5.0kb upstream 5.0kb upstream 8006 true Chr01: 6258121-6266126 Phaseolus vulgaris
Phvul.001G055500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6261127-6266126 Phaseolus vulgaris
Phvul.001G055500 5.0kb downstream 5.0kb downstream 8006 true Chr01: 6253121-6261126 Phaseolus vulgaris
Phvul.001G055500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6253121-6258120 Phaseolus vulgaris
Phvul.001G055500 10.0kb upstream 10.0kb upstream 13006 true Chr01: 6258121-6271126 Phaseolus vulgaris
Phvul.001G055500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6261127-6271126 Phaseolus vulgaris
Phvul.001G055500 10.0kb downstream 10.0kb downstream 13006 true Chr01: 6248121-6261126 Phaseolus vulgaris
Phvul.001G055500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6248121-6258120 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026563 5273 Angiosperm View MSA
122311759 5265 Fabidae View MSA
124069819 5270 Rosid View MSA
123744621 5271 Pentapetalae View MSA
122789536 5272 Eudicot View MSA
121296391 5274 Embryophyte View MSA
123334563 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3196 0.0 29.7124   Low
cufflinks 23.3937 0.0 60.5077   High
cufflinks 15.0743 0.0 39.1258    
cufflinks 18.7849 0.0 48.6145    
cufflinks 16.907 0.0 43.7917    
cufflinks 21.918 0.0 56.6612   High
cufflinks 13.734 0.0 35.7711    
cufflinks 17.0705 0.0 44.18    
cufflinks 14.3403 0.0 37.3468    
cufflinks 13.2797 0.0 34.6145    
cufflinks 19.872 0.0 51.3729    

0 Strain