Gene : Phvul.001G172900 P. vulgaris v2.1
Defline:  (1 of 1) K02069 - putative ABC transport system permease protein (ABC.X2.P) Genomic Order:  1707
Name:  ? Phvul.001G172900 Secondary Identifier:  ? PAC:37171117
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G172900 0.5kb upstream 0.5kb upstream 2560 true Chr01: 42984881-42987440 Phaseolus vulgaris
Phvul.001G172900 0.5kb upstream 0.5kb upstream 500 false Chr01: 42986941-42987440 Phaseolus vulgaris
Phvul.001G172900 0.5kb downstream 0.5kb downstream 2560 true Chr01: 42984381-42986940 Phaseolus vulgaris
Phvul.001G172900 0.5kb downstream 0.5kb downstream 500 false Chr01: 42984381-42984880 Phaseolus vulgaris
Phvul.001G172900 1.0kb upstream 1.0kb upstream 3060 true Chr01: 42984881-42987940 Phaseolus vulgaris
Phvul.001G172900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42986941-42987940 Phaseolus vulgaris
Phvul.001G172900 1.0kb downstream 1.0kb downstream 3060 true Chr01: 42983881-42986940 Phaseolus vulgaris
Phvul.001G172900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42983881-42984880 Phaseolus vulgaris
Phvul.001G172900 2.0kb upstream 2.0kb upstream 4060 true Chr01: 42984881-42988940 Phaseolus vulgaris
Phvul.001G172900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42986941-42988940 Phaseolus vulgaris
Phvul.001G172900 2.0kb downstream 2.0kb downstream 4060 true Chr01: 42982881-42986940 Phaseolus vulgaris
Phvul.001G172900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42982881-42984880 Phaseolus vulgaris
Phvul.001G172900 5.0kb upstream 5.0kb upstream 7060 true Chr01: 42984881-42991940 Phaseolus vulgaris
Phvul.001G172900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42986941-42991940 Phaseolus vulgaris
Phvul.001G172900 5.0kb downstream 5.0kb downstream 7060 true Chr01: 42979881-42986940 Phaseolus vulgaris
Phvul.001G172900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42979881-42984880 Phaseolus vulgaris
Phvul.001G172900 10.0kb upstream 10.0kb upstream 12060 true Chr01: 42984881-42996940 Phaseolus vulgaris
Phvul.001G172900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42986941-42996940 Phaseolus vulgaris
Phvul.001G172900 10.0kb downstream 10.0kb downstream 12060 true Chr01: 42974881-42986940 Phaseolus vulgaris
Phvul.001G172900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42974881-42984880 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309876 5265 Fabidae View MSA
124064060 5270 Rosid View MSA
123739826 5271 Pentapetalae View MSA
122792432 5272 Eudicot View MSA
122042449 5273 Angiosperm View MSA
121345105 5274 Embryophyte View MSA
123424866 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.76527 0.0 27.3178    
cufflinks 5.16755 0.0 15.399   Low
cufflinks 7.61732 0.0 21.7865    
cufflinks 20.4714 0.0 53.8915    
cufflinks 9.6292 0.0 26.9554    
cufflinks 6.24041 0.0 18.2166   Low
cufflinks 16.2512 0.0 43.3809    
cufflinks 26.5426 0.0 68.9992   High
cufflinks 26.0562 0.0 67.7328   High
cufflinks 11.5648 0.0 31.8199    
cufflinks 15.9252 0.0 42.6599    

0 Strain