Gene : Phvul.001G175800 P. vulgaris v2.1
Defline:  (1 of 10) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1737
Name:  ? Phvul.001G175800 Secondary Identifier:  ? PAC:37170493
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G175800 0.5kb upstream 0.5kb upstream 2836 true Chr01: 43245639-43248474 Phaseolus vulgaris
Phvul.001G175800 0.5kb upstream 0.5kb upstream 500 false Chr01: 43247975-43248474 Phaseolus vulgaris
Phvul.001G175800 0.5kb downstream 0.5kb downstream 2836 true Chr01: 43245139-43247974 Phaseolus vulgaris
Phvul.001G175800 0.5kb downstream 0.5kb downstream 500 false Chr01: 43245139-43245638 Phaseolus vulgaris
Phvul.001G175800 1.0kb upstream 1.0kb upstream 3336 true Chr01: 43245639-43248974 Phaseolus vulgaris
Phvul.001G175800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43247975-43248974 Phaseolus vulgaris
Phvul.001G175800 1.0kb downstream 1.0kb downstream 3336 true Chr01: 43244639-43247974 Phaseolus vulgaris
Phvul.001G175800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43244639-43245638 Phaseolus vulgaris
Phvul.001G175800 2.0kb upstream 2.0kb upstream 4336 true Chr01: 43245639-43249974 Phaseolus vulgaris
Phvul.001G175800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43247975-43249974 Phaseolus vulgaris
Phvul.001G175800 2.0kb downstream 2.0kb downstream 4336 true Chr01: 43243639-43247974 Phaseolus vulgaris
Phvul.001G175800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43243639-43245638 Phaseolus vulgaris
Phvul.001G175800 5.0kb upstream 5.0kb upstream 7336 true Chr01: 43245639-43252974 Phaseolus vulgaris
Phvul.001G175800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43247975-43252974 Phaseolus vulgaris
Phvul.001G175800 5.0kb downstream 5.0kb downstream 7336 true Chr01: 43240639-43247974 Phaseolus vulgaris
Phvul.001G175800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43240639-43245638 Phaseolus vulgaris
Phvul.001G175800 10.0kb upstream 10.0kb upstream 12336 true Chr01: 43245639-43257974 Phaseolus vulgaris
Phvul.001G175800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43247975-43257974 Phaseolus vulgaris
Phvul.001G175800 10.0kb downstream 10.0kb downstream 12336 true Chr01: 43235639-43247974 Phaseolus vulgaris
Phvul.001G175800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43235639-43245638 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307298 5265 Fabidae View MSA
124070867 5270 Rosid View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.98465 0.0 6.32732    
cufflinks 0.894185 0.0 3.12033    
cufflinks 4.81116 0.0 13.8159   High
cufflinks 4.35249 0.0 12.7881   High
cufflinks 3.1672 0.0 9.67365    
cufflinks 1.30075 0.0 4.3516    
cufflinks 1.03436 0.0 3.5485    
cufflinks 0.378495 0.0 1.41859 Low Low
cufflinks 2.7294 0.0 8.41143    
cufflinks 2.25451 0.0 7.10404    
cufflinks 1.98571 0.0 6.37939    

0 Strain