Gene : Phvul.001G175900 P. vulgaris v2.1
Defline:  (1 of 20) K08472 - mlo protein (MLO) Genomic Order:  1738
Name:  ? Phvul.001G175900 Secondary Identifier:  ? PAC:37170999
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G175900 0.5kb upstream 0.5kb upstream 9214 true Chr01: 43248053-43257266 Phaseolus vulgaris
Phvul.001G175900 0.5kb upstream 0.5kb upstream 500 false Chr01: 43256767-43257266 Phaseolus vulgaris
Phvul.001G175900 0.5kb downstream 0.5kb downstream 9214 true Chr01: 43247553-43256766 Phaseolus vulgaris
Phvul.001G175900 0.5kb downstream 0.5kb downstream 500 false Chr01: 43247553-43248052 Phaseolus vulgaris
Phvul.001G175900 1.0kb upstream 1.0kb upstream 9714 true Chr01: 43248053-43257766 Phaseolus vulgaris
Phvul.001G175900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43256767-43257766 Phaseolus vulgaris
Phvul.001G175900 1.0kb downstream 1.0kb downstream 9714 true Chr01: 43247053-43256766 Phaseolus vulgaris
Phvul.001G175900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43247053-43248052 Phaseolus vulgaris
Phvul.001G175900 2.0kb upstream 2.0kb upstream 10714 true Chr01: 43248053-43258766 Phaseolus vulgaris
Phvul.001G175900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43256767-43258766 Phaseolus vulgaris
Phvul.001G175900 2.0kb downstream 2.0kb downstream 10714 true Chr01: 43246053-43256766 Phaseolus vulgaris
Phvul.001G175900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43246053-43248052 Phaseolus vulgaris
Phvul.001G175900 5.0kb upstream 5.0kb upstream 13714 true Chr01: 43248053-43261766 Phaseolus vulgaris
Phvul.001G175900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43256767-43261766 Phaseolus vulgaris
Phvul.001G175900 5.0kb downstream 5.0kb downstream 13714 true Chr01: 43243053-43256766 Phaseolus vulgaris
Phvul.001G175900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43243053-43248052 Phaseolus vulgaris
Phvul.001G175900 10.0kb upstream 10.0kb upstream 18714 true Chr01: 43248053-43266766 Phaseolus vulgaris
Phvul.001G175900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43256767-43266766 Phaseolus vulgaris
Phvul.001G175900 10.0kb downstream 10.0kb downstream 18714 true Chr01: 43238053-43256766 Phaseolus vulgaris
Phvul.001G175900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43238053-43248052 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313015 5265 Fabidae View MSA
124072355 5270 Rosid View MSA
123737191 5271 Pentapetalae View MSA
122795625 5272 Eudicot View MSA
122050074 5273 Angiosperm View MSA
121311724 5274 Embryophyte View MSA
123348984 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46563 0.0 7.62835   High
cufflinks 0.0219943 0.0 0.131932 Low Low
cufflinks 0.99797 0.0 5.52764   High
cufflinks 0.0461073 0.0 0.230716 Low Low
cufflinks 0.874411 0.0 3.91273    
cufflinks 0.452017 0.0 3.09008 Low  
cufflinks 0.106844 0.0 0.463144 Low  
cufflinks 0.0563079 0.0 0.260274 Low Low
cufflinks 0.226687 0.0 0.906103 Low  
cufflinks 0.362384 0.0 1.77334    
cufflinks 0.245048 0.0 0.977635 Low  

0 Strain