Gene : Phvul.001G174700 P. vulgaris v2.1
Defline:  (1 of 1) K10737 - DNA helicase MCM8 [EC:3.6.4.12] (MCM8) Genomic Order:  1725
Name:  ? Phvul.001G174700 Secondary Identifier:  ? PAC:37169674
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G174700 0.5kb upstream 0.5kb upstream 12035 true Chr01: 43137208-43149242 Phaseolus vulgaris
Phvul.001G174700 0.5kb upstream 0.5kb upstream 500 false Chr01: 43148743-43149242 Phaseolus vulgaris
Phvul.001G174700 0.5kb downstream 0.5kb downstream 12035 true Chr01: 43136708-43148742 Phaseolus vulgaris
Phvul.001G174700 0.5kb downstream 0.5kb downstream 500 false Chr01: 43136708-43137207 Phaseolus vulgaris
Phvul.001G174700 1.0kb upstream 1.0kb upstream 12535 true Chr01: 43137208-43149742 Phaseolus vulgaris
Phvul.001G174700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43148743-43149742 Phaseolus vulgaris
Phvul.001G174700 1.0kb downstream 1.0kb downstream 12535 true Chr01: 43136208-43148742 Phaseolus vulgaris
Phvul.001G174700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43136208-43137207 Phaseolus vulgaris
Phvul.001G174700 2.0kb upstream 2.0kb upstream 13535 true Chr01: 43137208-43150742 Phaseolus vulgaris
Phvul.001G174700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43148743-43150742 Phaseolus vulgaris
Phvul.001G174700 2.0kb downstream 2.0kb downstream 13535 true Chr01: 43135208-43148742 Phaseolus vulgaris
Phvul.001G174700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43135208-43137207 Phaseolus vulgaris
Phvul.001G174700 5.0kb upstream 5.0kb upstream 16535 true Chr01: 43137208-43153742 Phaseolus vulgaris
Phvul.001G174700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43148743-43153742 Phaseolus vulgaris
Phvul.001G174700 5.0kb downstream 5.0kb downstream 16535 true Chr01: 43132208-43148742 Phaseolus vulgaris
Phvul.001G174700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43132208-43137207 Phaseolus vulgaris
Phvul.001G174700 10.0kb upstream 10.0kb upstream 21535 true Chr01: 43137208-43158742 Phaseolus vulgaris
Phvul.001G174700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43148743-43158742 Phaseolus vulgaris
Phvul.001G174700 10.0kb downstream 10.0kb downstream 21535 true Chr01: 43127208-43148742 Phaseolus vulgaris
Phvul.001G174700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43127208-43137207 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304036 5265 Fabidae View MSA
124061184 5270 Rosid View MSA
123738833 5271 Pentapetalae View MSA
122795718 5272 Eudicot View MSA
122042688 5273 Angiosperm View MSA
121346609 5274 Embryophyte View MSA
123424518 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.46073 0.0 1.63346   Low
cufflinks 0.594298 0.0 2.05263    
cufflinks 0.571003 0.0 1.97634    
cufflinks 0.524279 0.0 1.84925 Low  
cufflinks 0.718633 0.0 2.44984    
cufflinks 0.944903 0.0 3.09344    
cufflinks 1.63565 0.0 5.04633   High
cufflinks 1.26629 0.0 3.99915   High
cufflinks 0.970012 0.0 3.17833    
cufflinks 0.362877 0.0 1.3174   Low
cufflinks 0.801549 0.0 2.69411    

0 Strain