Gene : Phvul.001G180900 P. vulgaris v2.1
Defline:  (1 of 4) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Genomic Order:  1789
Name:  ? Phvul.001G180900 Secondary Identifier:  ? PAC:37168852
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CYANCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-241 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7115 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7117 Phaseolus vulgaris pathologic  
Pvulgaris PWYQT-4429 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G180900 0.5kb upstream 0.5kb upstream 2642 true Chr01: 43861949-43864590 Phaseolus vulgaris
Phvul.001G180900 0.5kb upstream 0.5kb upstream 500 false Chr01: 43864091-43864590 Phaseolus vulgaris
Phvul.001G180900 0.5kb downstream 0.5kb downstream 2642 true Chr01: 43861449-43864090 Phaseolus vulgaris
Phvul.001G180900 0.5kb downstream 0.5kb downstream 500 false Chr01: 43861449-43861948 Phaseolus vulgaris
Phvul.001G180900 1.0kb upstream 1.0kb upstream 3142 true Chr01: 43861949-43865090 Phaseolus vulgaris
Phvul.001G180900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43864091-43865090 Phaseolus vulgaris
Phvul.001G180900 1.0kb downstream 1.0kb downstream 3142 true Chr01: 43860949-43864090 Phaseolus vulgaris
Phvul.001G180900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43860949-43861948 Phaseolus vulgaris
Phvul.001G180900 2.0kb upstream 2.0kb upstream 4142 true Chr01: 43861949-43866090 Phaseolus vulgaris
Phvul.001G180900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43864091-43866090 Phaseolus vulgaris
Phvul.001G180900 2.0kb downstream 2.0kb downstream 4142 true Chr01: 43859949-43864090 Phaseolus vulgaris
Phvul.001G180900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43859949-43861948 Phaseolus vulgaris
Phvul.001G180900 5.0kb upstream 5.0kb upstream 7142 true Chr01: 43861949-43869090 Phaseolus vulgaris
Phvul.001G180900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43864091-43869090 Phaseolus vulgaris
Phvul.001G180900 5.0kb downstream 5.0kb downstream 7142 true Chr01: 43856949-43864090 Phaseolus vulgaris
Phvul.001G180900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43856949-43861948 Phaseolus vulgaris
Phvul.001G180900 10.0kb upstream 10.0kb upstream 12142 true Chr01: 43861949-43874090 Phaseolus vulgaris
Phvul.001G180900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43864091-43874090 Phaseolus vulgaris
Phvul.001G180900 10.0kb downstream 10.0kb downstream 12142 true Chr01: 43851949-43864090 Phaseolus vulgaris
Phvul.001G180900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43851949-43861948 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297584 5265 Fabidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.470911 0.0 1.83319 Low  
cufflinks 0.368865 0.0 1.46036 Low  
cufflinks 0.0430725 0.0 0.20921 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain