Gene : Phvul.001G181500 P. vulgaris v2.1
Defline:  (1 of 1) K14556 - U3 small nucleolar RNA-associated protein 12 (DIP2, UTP12, WDR3) Genomic Order:  1795
Name:  ? Phvul.001G181500 Secondary Identifier:  ? PAC:37167988
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G181500 0.5kb upstream 0.5kb upstream 9566 true Chr01: 43946063-43955628 Phaseolus vulgaris
Phvul.001G181500 0.5kb upstream 0.5kb upstream 500 false Chr01: 43946063-43946562 Phaseolus vulgaris
Phvul.001G181500 0.5kb downstream 0.5kb downstream 9566 true Chr01: 43946563-43956128 Phaseolus vulgaris
Phvul.001G181500 0.5kb downstream 0.5kb downstream 500 false Chr01: 43955629-43956128 Phaseolus vulgaris
Phvul.001G181500 1.0kb upstream 1.0kb upstream 10066 true Chr01: 43945563-43955628 Phaseolus vulgaris
Phvul.001G181500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43945563-43946562 Phaseolus vulgaris
Phvul.001G181500 1.0kb downstream 1.0kb downstream 10066 true Chr01: 43946563-43956628 Phaseolus vulgaris
Phvul.001G181500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43955629-43956628 Phaseolus vulgaris
Phvul.001G181500 2.0kb upstream 2.0kb upstream 11066 true Chr01: 43944563-43955628 Phaseolus vulgaris
Phvul.001G181500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43944563-43946562 Phaseolus vulgaris
Phvul.001G181500 2.0kb downstream 2.0kb downstream 11066 true Chr01: 43946563-43957628 Phaseolus vulgaris
Phvul.001G181500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43955629-43957628 Phaseolus vulgaris
Phvul.001G181500 5.0kb upstream 5.0kb upstream 14066 true Chr01: 43941563-43955628 Phaseolus vulgaris
Phvul.001G181500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43941563-43946562 Phaseolus vulgaris
Phvul.001G181500 5.0kb downstream 5.0kb downstream 14066 true Chr01: 43946563-43960628 Phaseolus vulgaris
Phvul.001G181500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43955629-43960628 Phaseolus vulgaris
Phvul.001G181500 10.0kb upstream 10.0kb upstream 19066 true Chr01: 43936563-43955628 Phaseolus vulgaris
Phvul.001G181500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43936563-43946562 Phaseolus vulgaris
Phvul.001G181500 10.0kb downstream 10.0kb downstream 19066 true Chr01: 43946563-43965628 Phaseolus vulgaris
Phvul.001G181500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43955629-43965628 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306718 5265 Fabidae View MSA
124061475 5270 Rosid View MSA
123739283 5271 Pentapetalae View MSA
122787451 5272 Eudicot View MSA
122046155 5273 Angiosperm View MSA
121346306 5274 Embryophyte View MSA
123424601 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.35284 0.0 9.35304   Low
cufflinks 7.42115 0.0 19.4869    
cufflinks 3.58673 0.0 9.94872    
cufflinks 3.00676 0.0 8.55403   Low
cufflinks 5.78662 0.0 15.5257    
cufflinks 3.60374 0.0 10.006    
cufflinks 7.90939 0.0 20.705    
cufflinks 8.93832 0.0 23.239   High
cufflinks 9.88918 0.0 25.6806   High
cufflinks 7.08724 0.0 18.6601    
cufflinks 4.70132 0.0 12.8067    

0 Strain