Gene : Phvul.001G181600 P. vulgaris v2.1
Defline:  (1 of 37) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  1796
Name:  ? Phvul.001G181600 Secondary Identifier:  ? PAC:37168730
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G181600 0.5kb upstream 0.5kb upstream 2668 true Chr01: 43956896-43959563 Phaseolus vulgaris
Phvul.001G181600 0.5kb upstream 0.5kb upstream 500 false Chr01: 43959064-43959563 Phaseolus vulgaris
Phvul.001G181600 0.5kb downstream 0.5kb downstream 2668 true Chr01: 43956396-43959063 Phaseolus vulgaris
Phvul.001G181600 0.5kb downstream 0.5kb downstream 500 false Chr01: 43956396-43956895 Phaseolus vulgaris
Phvul.001G181600 1.0kb upstream 1.0kb upstream 3168 true Chr01: 43956896-43960063 Phaseolus vulgaris
Phvul.001G181600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43959064-43960063 Phaseolus vulgaris
Phvul.001G181600 1.0kb downstream 1.0kb downstream 3168 true Chr01: 43955896-43959063 Phaseolus vulgaris
Phvul.001G181600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43955896-43956895 Phaseolus vulgaris
Phvul.001G181600 2.0kb upstream 2.0kb upstream 4168 true Chr01: 43956896-43961063 Phaseolus vulgaris
Phvul.001G181600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43959064-43961063 Phaseolus vulgaris
Phvul.001G181600 2.0kb downstream 2.0kb downstream 4168 true Chr01: 43954896-43959063 Phaseolus vulgaris
Phvul.001G181600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43954896-43956895 Phaseolus vulgaris
Phvul.001G181600 5.0kb upstream 5.0kb upstream 7168 true Chr01: 43956896-43964063 Phaseolus vulgaris
Phvul.001G181600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43959064-43964063 Phaseolus vulgaris
Phvul.001G181600 5.0kb downstream 5.0kb downstream 7168 true Chr01: 43951896-43959063 Phaseolus vulgaris
Phvul.001G181600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43951896-43956895 Phaseolus vulgaris
Phvul.001G181600 10.0kb upstream 10.0kb upstream 12168 true Chr01: 43956896-43969063 Phaseolus vulgaris
Phvul.001G181600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43959064-43969063 Phaseolus vulgaris
Phvul.001G181600 10.0kb downstream 10.0kb downstream 12168 true Chr01: 43946896-43959063 Phaseolus vulgaris
Phvul.001G181600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43946896-43956895 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027787 5273 Angiosperm View MSA
122312203 5265 Fabidae View MSA
124069936 5270 Rosid View MSA
123745991 5271 Pentapetalae View MSA
122796548 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121297395 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0355921 0.0 0.176394 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.199297 0.0 0.832967 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0706957 0.0 0.325708 Low  

0 Strain