Gene : Phvul.001G167600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22838 - WD REPEAT PROTEIN 26-RELATED Genomic Order:  1653
Name:  ? Phvul.001G167600 Secondary Identifier:  ? PAC:37169331
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G167600 0.5kb upstream 0.5kb upstream 6983 true Chr01: 42268075-42275057 Phaseolus vulgaris
Phvul.001G167600 0.5kb upstream 0.5kb upstream 500 false Chr01: 42274558-42275057 Phaseolus vulgaris
Phvul.001G167600 0.5kb downstream 0.5kb downstream 6983 true Chr01: 42267575-42274557 Phaseolus vulgaris
Phvul.001G167600 0.5kb downstream 0.5kb downstream 500 false Chr01: 42267575-42268074 Phaseolus vulgaris
Phvul.001G167600 1.0kb upstream 1.0kb upstream 7483 true Chr01: 42268075-42275557 Phaseolus vulgaris
Phvul.001G167600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42274558-42275557 Phaseolus vulgaris
Phvul.001G167600 1.0kb downstream 1.0kb downstream 7483 true Chr01: 42267075-42274557 Phaseolus vulgaris
Phvul.001G167600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42267075-42268074 Phaseolus vulgaris
Phvul.001G167600 2.0kb upstream 2.0kb upstream 8483 true Chr01: 42268075-42276557 Phaseolus vulgaris
Phvul.001G167600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42274558-42276557 Phaseolus vulgaris
Phvul.001G167600 2.0kb downstream 2.0kb downstream 8483 true Chr01: 42266075-42274557 Phaseolus vulgaris
Phvul.001G167600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42266075-42268074 Phaseolus vulgaris
Phvul.001G167600 5.0kb upstream 5.0kb upstream 11483 true Chr01: 42268075-42279557 Phaseolus vulgaris
Phvul.001G167600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42274558-42279557 Phaseolus vulgaris
Phvul.001G167600 5.0kb downstream 5.0kb downstream 11483 true Chr01: 42263075-42274557 Phaseolus vulgaris
Phvul.001G167600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42263075-42268074 Phaseolus vulgaris
Phvul.001G167600 10.0kb upstream 10.0kb upstream 16483 true Chr01: 42268075-42284557 Phaseolus vulgaris
Phvul.001G167600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42274558-42284557 Phaseolus vulgaris
Phvul.001G167600 10.0kb downstream 10.0kb downstream 16483 true Chr01: 42258075-42274557 Phaseolus vulgaris
Phvul.001G167600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42258075-42268074 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307186 5265 Fabidae View MSA
124068172 5270 Rosid View MSA
123740658 5271 Pentapetalae View MSA
122788774 5272 Eudicot View MSA
122043991 5273 Angiosperm View MSA
121310222 5274 Embryophyte View MSA
123426468 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.44135 0.0 24.972   High
cufflinks 7.67833 0.0 20.6404    
cufflinks 7.60579 0.0 20.4225    
cufflinks 6.70234 0.0 18.3741    
cufflinks 6.51731 0.0 17.8247    
cufflinks 5.24228 0.0 14.5555   Low
cufflinks 6.02544 0.0 16.5367    
cufflinks 5.76107 0.0 15.8291    
cufflinks 6.77508 0.0 18.4516    
cufflinks 10.5532 0.0 27.7527   High
cufflinks 6.26207 0.0 17.1837    

0 Strain