Gene : Phvul.001G168300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24106:SF146 - RNI-LIKE SUPERFAMILY PROTEIN Genomic Order:  1660
Name:  ? Phvul.001G168300 Secondary Identifier:  ? PAC:37167690
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G168300 0.5kb upstream 0.5kb upstream 10372 true Chr01: 42423931-42434302 Phaseolus vulgaris
Phvul.001G168300 0.5kb upstream 0.5kb upstream 500 false Chr01: 42423931-42424430 Phaseolus vulgaris
Phvul.001G168300 0.5kb downstream 0.5kb downstream 10372 true Chr01: 42424431-42434802 Phaseolus vulgaris
Phvul.001G168300 0.5kb downstream 0.5kb downstream 500 false Chr01: 42434303-42434802 Phaseolus vulgaris
Phvul.001G168300 1.0kb upstream 1.0kb upstream 10872 true Chr01: 42423431-42434302 Phaseolus vulgaris
Phvul.001G168300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42423431-42424430 Phaseolus vulgaris
Phvul.001G168300 1.0kb downstream 1.0kb downstream 10872 true Chr01: 42424431-42435302 Phaseolus vulgaris
Phvul.001G168300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42434303-42435302 Phaseolus vulgaris
Phvul.001G168300 2.0kb upstream 2.0kb upstream 11872 true Chr01: 42422431-42434302 Phaseolus vulgaris
Phvul.001G168300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42422431-42424430 Phaseolus vulgaris
Phvul.001G168300 2.0kb downstream 2.0kb downstream 11872 true Chr01: 42424431-42436302 Phaseolus vulgaris
Phvul.001G168300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42434303-42436302 Phaseolus vulgaris
Phvul.001G168300 5.0kb upstream 5.0kb upstream 14872 true Chr01: 42419431-42434302 Phaseolus vulgaris
Phvul.001G168300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42419431-42424430 Phaseolus vulgaris
Phvul.001G168300 5.0kb downstream 5.0kb downstream 14872 true Chr01: 42424431-42439302 Phaseolus vulgaris
Phvul.001G168300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42434303-42439302 Phaseolus vulgaris
Phvul.001G168300 10.0kb upstream 10.0kb upstream 19872 true Chr01: 42414431-42434302 Phaseolus vulgaris
Phvul.001G168300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42414431-42424430 Phaseolus vulgaris
Phvul.001G168300 10.0kb downstream 10.0kb downstream 19872 true Chr01: 42424431-42444302 Phaseolus vulgaris
Phvul.001G168300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42434303-42444302 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305677 5265 Fabidae View MSA
124050272 5270 Rosid View MSA
123739993 5271 Pentapetalae View MSA
122792810 5272 Eudicot View MSA
122043021 5273 Angiosperm View MSA
121348154 5274 Embryophyte View MSA
123380748 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61991 0.0 5.26261    
cufflinks 1.57244 0.0 5.12951   Low
cufflinks 1.94996 0.0 6.19337    
cufflinks 1.51979 0.0 5.00101   Low
cufflinks 2.50305 0.0 7.8042   High
cufflinks 1.5079 0.0 4.94551   Low
cufflinks 2.54663 0.0 7.89403   High
cufflinks 2.3492 0.0 7.30601    
cufflinks 2.35851 0.0 7.39199    
cufflinks 2.64416 0.0 8.12796   High
cufflinks 1.86819 0.0 6.0158    

0 Strain