Gene : Phvul.001G171000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33431:SF2 - GB Genomic Order:  1688
Name:  ? Phvul.001G171000 Secondary Identifier:  ? PAC:37170072
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G171000 0.5kb upstream 0.5kb upstream 1824 true Chr01: 42773866-42775689 Phaseolus vulgaris
Phvul.001G171000 0.5kb upstream 0.5kb upstream 500 false Chr01: 42773866-42774365 Phaseolus vulgaris
Phvul.001G171000 0.5kb downstream 0.5kb downstream 1824 true Chr01: 42774366-42776189 Phaseolus vulgaris
Phvul.001G171000 0.5kb downstream 0.5kb downstream 500 false Chr01: 42775690-42776189 Phaseolus vulgaris
Phvul.001G171000 1.0kb upstream 1.0kb upstream 2324 true Chr01: 42773366-42775689 Phaseolus vulgaris
Phvul.001G171000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42773366-42774365 Phaseolus vulgaris
Phvul.001G171000 1.0kb downstream 1.0kb downstream 2324 true Chr01: 42774366-42776689 Phaseolus vulgaris
Phvul.001G171000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42775690-42776689 Phaseolus vulgaris
Phvul.001G171000 2.0kb upstream 2.0kb upstream 3324 true Chr01: 42772366-42775689 Phaseolus vulgaris
Phvul.001G171000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42772366-42774365 Phaseolus vulgaris
Phvul.001G171000 2.0kb downstream 2.0kb downstream 3324 true Chr01: 42774366-42777689 Phaseolus vulgaris
Phvul.001G171000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42775690-42777689 Phaseolus vulgaris
Phvul.001G171000 5.0kb upstream 5.0kb upstream 6324 true Chr01: 42769366-42775689 Phaseolus vulgaris
Phvul.001G171000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42769366-42774365 Phaseolus vulgaris
Phvul.001G171000 5.0kb downstream 5.0kb downstream 6324 true Chr01: 42774366-42780689 Phaseolus vulgaris
Phvul.001G171000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42775690-42780689 Phaseolus vulgaris
Phvul.001G171000 10.0kb upstream 10.0kb upstream 11324 true Chr01: 42764366-42775689 Phaseolus vulgaris
Phvul.001G171000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42764366-42774365 Phaseolus vulgaris
Phvul.001G171000 10.0kb downstream 10.0kb downstream 11324 true Chr01: 42774366-42785689 Phaseolus vulgaris
Phvul.001G171000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42775690-42785689 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311999 5265 Fabidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.197158 0.0 0.831503 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.25054 0.0 4.51065    
cufflinks 2.83185 0.0 9.29783   High
cufflinks 0.182002 0.0 0.769597 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.719976 0.0 2.73973    

0 Strain