Gene : Phvul.001G161200 P. vulgaris v2.1
Genomic Order:  1588 Name:  ? Phvul.001G161200
Secondary Identifier:  ? PAC:37169343
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G161200 0.5kb upstream 0.5kb upstream 1557 true Chr01: 41520288-41521844 Phaseolus vulgaris
Phvul.001G161200 0.5kb upstream 0.5kb upstream 500 false Chr01: 41521345-41521844 Phaseolus vulgaris
Phvul.001G161200 0.5kb downstream 0.5kb downstream 1557 true Chr01: 41519788-41521344 Phaseolus vulgaris
Phvul.001G161200 0.5kb downstream 0.5kb downstream 500 false Chr01: 41519788-41520287 Phaseolus vulgaris
Phvul.001G161200 1.0kb upstream 1.0kb upstream 2057 true Chr01: 41520288-41522344 Phaseolus vulgaris
Phvul.001G161200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41521345-41522344 Phaseolus vulgaris
Phvul.001G161200 1.0kb downstream 1.0kb downstream 2057 true Chr01: 41519288-41521344 Phaseolus vulgaris
Phvul.001G161200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41519288-41520287 Phaseolus vulgaris
Phvul.001G161200 2.0kb upstream 2.0kb upstream 3057 true Chr01: 41520288-41523344 Phaseolus vulgaris
Phvul.001G161200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41521345-41523344 Phaseolus vulgaris
Phvul.001G161200 2.0kb downstream 2.0kb downstream 3057 true Chr01: 41518288-41521344 Phaseolus vulgaris
Phvul.001G161200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41518288-41520287 Phaseolus vulgaris
Phvul.001G161200 5.0kb upstream 5.0kb upstream 6057 true Chr01: 41520288-41526344 Phaseolus vulgaris
Phvul.001G161200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41521345-41526344 Phaseolus vulgaris
Phvul.001G161200 5.0kb downstream 5.0kb downstream 6057 true Chr01: 41515288-41521344 Phaseolus vulgaris
Phvul.001G161200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41515288-41520287 Phaseolus vulgaris
Phvul.001G161200 10.0kb upstream 10.0kb upstream 11057 true Chr01: 41520288-41531344 Phaseolus vulgaris
Phvul.001G161200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41521345-41531344 Phaseolus vulgaris
Phvul.001G161200 10.0kb downstream 10.0kb downstream 11057 true Chr01: 41510288-41521344 Phaseolus vulgaris
Phvul.001G161200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41510288-41520287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299784 5265 Fabidae View MSA
124067967 5270 Rosid View MSA
123737515 5271 Pentapetalae View MSA
122786496 5272 Eudicot View MSA
122044248 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51106 0.0 11.2428    
cufflinks 11.1464 0.0 31.4195   High
cufflinks 15.6985 0.0 43.0038   High
cufflinks 3.57136 0.0 11.4277    
cufflinks 5.58113 0.0 16.9213    
cufflinks 10.3584 0.0 29.3985   High
cufflinks 2.64421 0.0 8.66873    
cufflinks 3.24862 0.0 10.4613    
cufflinks 1.69674 0.0 5.8713   Low
cufflinks 1.57205 0.0 5.51863   Low
cufflinks 6.56146 0.0 19.4853    

0 Strain