Gene : Phvul.001G151100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR15615:SF20 - CYCLIN FAMILY PROTEIN-RELATED Genomic Order:  1486
Name:  ? Phvul.001G151100 Secondary Identifier:  ? PAC:37170208
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G151100 0.5kb upstream 0.5kb upstream 3249 true Chr01: 39948436-39951684 Phaseolus vulgaris
Phvul.001G151100 0.5kb upstream 0.5kb upstream 500 false Chr01: 39948436-39948935 Phaseolus vulgaris
Phvul.001G151100 0.5kb downstream 0.5kb downstream 3249 true Chr01: 39948936-39952184 Phaseolus vulgaris
Phvul.001G151100 0.5kb downstream 0.5kb downstream 500 false Chr01: 39951685-39952184 Phaseolus vulgaris
Phvul.001G151100 1.0kb upstream 1.0kb upstream 3749 true Chr01: 39947936-39951684 Phaseolus vulgaris
Phvul.001G151100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39947936-39948935 Phaseolus vulgaris
Phvul.001G151100 1.0kb downstream 1.0kb downstream 3749 true Chr01: 39948936-39952684 Phaseolus vulgaris
Phvul.001G151100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39951685-39952684 Phaseolus vulgaris
Phvul.001G151100 2.0kb upstream 2.0kb upstream 4749 true Chr01: 39946936-39951684 Phaseolus vulgaris
Phvul.001G151100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39946936-39948935 Phaseolus vulgaris
Phvul.001G151100 2.0kb downstream 2.0kb downstream 4749 true Chr01: 39948936-39953684 Phaseolus vulgaris
Phvul.001G151100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39951685-39953684 Phaseolus vulgaris
Phvul.001G151100 5.0kb upstream 5.0kb upstream 7749 true Chr01: 39943936-39951684 Phaseolus vulgaris
Phvul.001G151100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39943936-39948935 Phaseolus vulgaris
Phvul.001G151100 5.0kb downstream 5.0kb downstream 7749 true Chr01: 39948936-39956684 Phaseolus vulgaris
Phvul.001G151100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39951685-39956684 Phaseolus vulgaris
Phvul.001G151100 10.0kb upstream 10.0kb upstream 12749 true Chr01: 39938936-39951684 Phaseolus vulgaris
Phvul.001G151100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39938936-39948935 Phaseolus vulgaris
Phvul.001G151100 10.0kb downstream 10.0kb downstream 12749 true Chr01: 39948936-39961684 Phaseolus vulgaris
Phvul.001G151100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39951685-39961684 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064873 5270 Rosid View MSA
122307038 5265 Fabidae View MSA
123741517 5271 Pentapetalae View MSA
122792794 5272 Eudicot View MSA
122044853 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5313 0.0 39.913    
cufflinks 7.43079 0.0 24.3926   Low
cufflinks 20.7379 0.0 64.904   High
cufflinks 12.0267 0.0 37.0049    
cufflinks 17.2533 0.0 55.9671    
cufflinks 13.9397 0.0 45.5819    
cufflinks 20.434 0.0 63.0121   High
cufflinks 10.3511 0.0 35.2791    
cufflinks 19.7754 0.0 60.8447    
cufflinks 7.30376 0.0 24.3602   Low
cufflinks 19.2089 0.0 61.3486    

0 Strain