Gene : Phvul.001G151200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11089:SF36 - GTP-BINDING PROTEIN Genomic Order:  1487
Name:  ? Phvul.001G151200 Secondary Identifier:  ? PAC:37169064
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G151200 0.5kb upstream 0.5kb upstream 4812 true Chr01: 39952241-39957052 Phaseolus vulgaris
Phvul.001G151200 0.5kb upstream 0.5kb upstream 500 false Chr01: 39956553-39957052 Phaseolus vulgaris
Phvul.001G151200 0.5kb downstream 0.5kb downstream 4812 true Chr01: 39951741-39956552 Phaseolus vulgaris
Phvul.001G151200 0.5kb downstream 0.5kb downstream 500 false Chr01: 39951741-39952240 Phaseolus vulgaris
Phvul.001G151200 1.0kb upstream 1.0kb upstream 5312 true Chr01: 39952241-39957552 Phaseolus vulgaris
Phvul.001G151200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39956553-39957552 Phaseolus vulgaris
Phvul.001G151200 1.0kb downstream 1.0kb downstream 5312 true Chr01: 39951241-39956552 Phaseolus vulgaris
Phvul.001G151200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39951241-39952240 Phaseolus vulgaris
Phvul.001G151200 2.0kb upstream 2.0kb upstream 6312 true Chr01: 39952241-39958552 Phaseolus vulgaris
Phvul.001G151200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39956553-39958552 Phaseolus vulgaris
Phvul.001G151200 2.0kb downstream 2.0kb downstream 6312 true Chr01: 39950241-39956552 Phaseolus vulgaris
Phvul.001G151200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39950241-39952240 Phaseolus vulgaris
Phvul.001G151200 5.0kb upstream 5.0kb upstream 9312 true Chr01: 39952241-39961552 Phaseolus vulgaris
Phvul.001G151200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39956553-39961552 Phaseolus vulgaris
Phvul.001G151200 5.0kb downstream 5.0kb downstream 9312 true Chr01: 39947241-39956552 Phaseolus vulgaris
Phvul.001G151200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39947241-39952240 Phaseolus vulgaris
Phvul.001G151200 10.0kb upstream 10.0kb upstream 14312 true Chr01: 39952241-39966552 Phaseolus vulgaris
Phvul.001G151200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39956553-39966552 Phaseolus vulgaris
Phvul.001G151200 10.0kb downstream 10.0kb downstream 14312 true Chr01: 39942241-39956552 Phaseolus vulgaris
Phvul.001G151200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39942241-39952240 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300014 5265 Fabidae View MSA
124068946 5270 Rosid View MSA
123736709 5271 Pentapetalae View MSA
122787126 5272 Eudicot View MSA
122042277 5273 Angiosperm View MSA
121346792 5274 Embryophyte View MSA
123427603 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9551 0.0 36.6678    
cufflinks 10.5385 0.0 28.2837    
cufflinks 23.7718 0.0 61.4608   High
cufflinks 8.88325 0.0 24.3172    
cufflinks 6.68969 0.0 18.7106    
cufflinks 19.8207 0.0 51.401   High
cufflinks 4.58784 0.0 13.2689   Low
cufflinks 4.6009 0.0 13.2515   Low
cufflinks 4.19268 0.0 12.2782   Low
cufflinks 8.25314 0.0 22.6038    
cufflinks 7.22539 0.0 20.0784    

0 Strain