Gene : Phvul.001G148900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  1464
Name:  ? Phvul.001G148900 Secondary Identifier:  ? PAC:37168294
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G148900 0.5kb upstream 0.5kb upstream 14741 true Chr01: 39583942-39598682 Phaseolus vulgaris
Phvul.001G148900 0.5kb upstream 0.5kb upstream 500 false Chr01: 39583942-39584441 Phaseolus vulgaris
Phvul.001G148900 0.5kb downstream 0.5kb downstream 14741 true Chr01: 39584442-39599182 Phaseolus vulgaris
Phvul.001G148900 0.5kb downstream 0.5kb downstream 500 false Chr01: 39598683-39599182 Phaseolus vulgaris
Phvul.001G148900 1.0kb upstream 1.0kb upstream 15241 true Chr01: 39583442-39598682 Phaseolus vulgaris
Phvul.001G148900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39583442-39584441 Phaseolus vulgaris
Phvul.001G148900 1.0kb downstream 1.0kb downstream 15241 true Chr01: 39584442-39599682 Phaseolus vulgaris
Phvul.001G148900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39598683-39599682 Phaseolus vulgaris
Phvul.001G148900 2.0kb upstream 2.0kb upstream 16241 true Chr01: 39582442-39598682 Phaseolus vulgaris
Phvul.001G148900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39582442-39584441 Phaseolus vulgaris
Phvul.001G148900 2.0kb downstream 2.0kb downstream 16241 true Chr01: 39584442-39600682 Phaseolus vulgaris
Phvul.001G148900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39598683-39600682 Phaseolus vulgaris
Phvul.001G148900 5.0kb upstream 5.0kb upstream 19241 true Chr01: 39579442-39598682 Phaseolus vulgaris
Phvul.001G148900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39579442-39584441 Phaseolus vulgaris
Phvul.001G148900 5.0kb downstream 5.0kb downstream 19241 true Chr01: 39584442-39603682 Phaseolus vulgaris
Phvul.001G148900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39598683-39603682 Phaseolus vulgaris
Phvul.001G148900 10.0kb upstream 10.0kb upstream 24241 true Chr01: 39574442-39598682 Phaseolus vulgaris
Phvul.001G148900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39574442-39584441 Phaseolus vulgaris
Phvul.001G148900 10.0kb downstream 10.0kb downstream 24241 true Chr01: 39584442-39608682 Phaseolus vulgaris
Phvul.001G148900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39598683-39608682 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296552 5265 Fabidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28007 0.0 12.0948   Low
cufflinks 6.18189 0.0 20.1823    
cufflinks 10.1654 0.0 37.6825    
cufflinks 3.09413 0.0 12.6378   Low
cufflinks 7.52729 0.0 27.5374    
cufflinks 8.35585 0.0 35.8129    
cufflinks 8.24156 0.0 26.3747    
cufflinks 7.72059 0.0 24.9767    
cufflinks 8.53835 0.0 27.2098    
cufflinks 12.1787 0.0 39.1006   High
cufflinks 5.7428 0.0 22.3798    

0 Strain