Gene : Phvul.001G149000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  1465
Name:  ? Phvul.001G149000 Secondary Identifier:  ? PAC:37170368
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris DETOX1-PWY-1 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G149000 0.5kb upstream 0.5kb upstream 3480 true Chr01: 39601413-39604892 Phaseolus vulgaris
Phvul.001G149000 0.5kb upstream 0.5kb upstream 500 false Chr01: 39601413-39601912 Phaseolus vulgaris
Phvul.001G149000 0.5kb downstream 0.5kb downstream 3480 true Chr01: 39601913-39605392 Phaseolus vulgaris
Phvul.001G149000 0.5kb downstream 0.5kb downstream 500 false Chr01: 39604893-39605392 Phaseolus vulgaris
Phvul.001G149000 1.0kb upstream 1.0kb upstream 3980 true Chr01: 39600913-39604892 Phaseolus vulgaris
Phvul.001G149000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39600913-39601912 Phaseolus vulgaris
Phvul.001G149000 1.0kb downstream 1.0kb downstream 3980 true Chr01: 39601913-39605892 Phaseolus vulgaris
Phvul.001G149000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39604893-39605892 Phaseolus vulgaris
Phvul.001G149000 2.0kb upstream 2.0kb upstream 4980 true Chr01: 39599913-39604892 Phaseolus vulgaris
Phvul.001G149000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39599913-39601912 Phaseolus vulgaris
Phvul.001G149000 2.0kb downstream 2.0kb downstream 4980 true Chr01: 39601913-39606892 Phaseolus vulgaris
Phvul.001G149000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39604893-39606892 Phaseolus vulgaris
Phvul.001G149000 5.0kb upstream 5.0kb upstream 7980 true Chr01: 39596913-39604892 Phaseolus vulgaris
Phvul.001G149000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39596913-39601912 Phaseolus vulgaris
Phvul.001G149000 5.0kb downstream 5.0kb downstream 7980 true Chr01: 39601913-39609892 Phaseolus vulgaris
Phvul.001G149000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39604893-39609892 Phaseolus vulgaris
Phvul.001G149000 10.0kb upstream 10.0kb upstream 12980 true Chr01: 39591913-39604892 Phaseolus vulgaris
Phvul.001G149000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39591913-39601912 Phaseolus vulgaris
Phvul.001G149000 10.0kb downstream 10.0kb downstream 12980 true Chr01: 39601913-39614892 Phaseolus vulgaris
Phvul.001G149000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39604893-39614892 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122303343 5265 Fabidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0621 0.0 63.5715   High
cufflinks 25.9388 0.0 68.1632   High
cufflinks 17.1093 0.0 46.2299    
cufflinks 18.4254 0.0 49.8123    
cufflinks 13.4487 0.0 37.4737    
cufflinks 19.0985 0.0 51.2144    
cufflinks 12.3994 0.0 34.3821    
cufflinks 10.8751 0.0 30.4225   Low
cufflinks 8.56363 0.0 24.6417   Low
cufflinks 20.5851 0.0 55.0071    
cufflinks 22.5361 0.0 59.8756    

0 Strain