Gene : Phvul.001G149100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33102:SF11 - DVL14-RELATED Genomic Order:  1466
Name:  ? Phvul.001G149100 Secondary Identifier:  ? PAC:37170857
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G149100 0.5kb upstream 0.5kb upstream 975 true Chr01: 39617011-39617985 Phaseolus vulgaris
Phvul.001G149100 0.5kb upstream 0.5kb upstream 500 false Chr01: 39617011-39617510 Phaseolus vulgaris
Phvul.001G149100 0.5kb downstream 0.5kb downstream 975 true Chr01: 39617511-39618485 Phaseolus vulgaris
Phvul.001G149100 0.5kb downstream 0.5kb downstream 500 false Chr01: 39617986-39618485 Phaseolus vulgaris
Phvul.001G149100 1.0kb upstream 1.0kb upstream 1475 true Chr01: 39616511-39617985 Phaseolus vulgaris
Phvul.001G149100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39616511-39617510 Phaseolus vulgaris
Phvul.001G149100 1.0kb downstream 1.0kb downstream 1475 true Chr01: 39617511-39618985 Phaseolus vulgaris
Phvul.001G149100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39617986-39618985 Phaseolus vulgaris
Phvul.001G149100 2.0kb upstream 2.0kb upstream 2475 true Chr01: 39615511-39617985 Phaseolus vulgaris
Phvul.001G149100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39615511-39617510 Phaseolus vulgaris
Phvul.001G149100 2.0kb downstream 2.0kb downstream 2475 true Chr01: 39617511-39619985 Phaseolus vulgaris
Phvul.001G149100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39617986-39619985 Phaseolus vulgaris
Phvul.001G149100 5.0kb upstream 5.0kb upstream 5475 true Chr01: 39612511-39617985 Phaseolus vulgaris
Phvul.001G149100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39612511-39617510 Phaseolus vulgaris
Phvul.001G149100 5.0kb downstream 5.0kb downstream 5475 true Chr01: 39617511-39622985 Phaseolus vulgaris
Phvul.001G149100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39617986-39622985 Phaseolus vulgaris
Phvul.001G149100 10.0kb upstream 10.0kb upstream 10475 true Chr01: 39607511-39617985 Phaseolus vulgaris
Phvul.001G149100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39607511-39617510 Phaseolus vulgaris
Phvul.001G149100 10.0kb downstream 10.0kb downstream 10475 true Chr01: 39617511-39627985 Phaseolus vulgaris
Phvul.001G149100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39617986-39627985 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792025 5273 Angiosperm View MSA
122299556 5265 Fabidae View MSA
124039536 5270 Rosid View MSA
123742333 5271 Pentapetalae View MSA
122795962 5272 Eudicot View MSA
121063286 5274 Embryophyte View MSA
123103048 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123492 0.0 0.612028 Low Low
cufflinks 2.40901 0.0 9.09798    
cufflinks 13.5187 0.0 42.862   High
cufflinks 0.206086 0.0 0.957297 Low  
cufflinks 2.81748 0.0 10.5623    
cufflinks 1.27841 0.0 5.07881    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.286447 0.0 1.29431 Low  
cufflinks 0.204412 0.0 0.965742 Low  
cufflinks 0.869811 0.0 3.56508    

0 Strain