Gene : Phvul.001G149400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  1469
Name:  ? Phvul.001G149400 Secondary Identifier:  ? PAC:37169735
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2681 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G149400 0.5kb upstream 0.5kb upstream 1699 true Chr01: 39644723-39646421 Phaseolus vulgaris
Phvul.001G149400 0.5kb upstream 0.5kb upstream 500 false Chr01: 39645922-39646421 Phaseolus vulgaris
Phvul.001G149400 0.5kb downstream 0.5kb downstream 1699 true Chr01: 39644223-39645921 Phaseolus vulgaris
Phvul.001G149400 0.5kb downstream 0.5kb downstream 500 false Chr01: 39644223-39644722 Phaseolus vulgaris
Phvul.001G149400 1.0kb upstream 1.0kb upstream 2199 true Chr01: 39644723-39646921 Phaseolus vulgaris
Phvul.001G149400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39645922-39646921 Phaseolus vulgaris
Phvul.001G149400 1.0kb downstream 1.0kb downstream 2199 true Chr01: 39643723-39645921 Phaseolus vulgaris
Phvul.001G149400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39643723-39644722 Phaseolus vulgaris
Phvul.001G149400 2.0kb upstream 2.0kb upstream 3199 true Chr01: 39644723-39647921 Phaseolus vulgaris
Phvul.001G149400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39645922-39647921 Phaseolus vulgaris
Phvul.001G149400 2.0kb downstream 2.0kb downstream 3199 true Chr01: 39642723-39645921 Phaseolus vulgaris
Phvul.001G149400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39642723-39644722 Phaseolus vulgaris
Phvul.001G149400 5.0kb upstream 5.0kb upstream 6199 true Chr01: 39644723-39650921 Phaseolus vulgaris
Phvul.001G149400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39645922-39650921 Phaseolus vulgaris
Phvul.001G149400 5.0kb downstream 5.0kb downstream 6199 true Chr01: 39639723-39645921 Phaseolus vulgaris
Phvul.001G149400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39639723-39644722 Phaseolus vulgaris
Phvul.001G149400 10.0kb upstream 10.0kb upstream 11199 true Chr01: 39644723-39655921 Phaseolus vulgaris
Phvul.001G149400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39645922-39655921 Phaseolus vulgaris
Phvul.001G149400 10.0kb downstream 10.0kb downstream 11199 true Chr01: 39634723-39645921 Phaseolus vulgaris
Phvul.001G149400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39634723-39644722 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253878 5265 Fabidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.342167 0.0 1.31334 Low  
cufflinks 0.468669 0.0 1.75067 Low  
cufflinks 1.02344 0.0 3.59863    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.06838 0.0 3.69147    
cufflinks 0.081513 0.0 0.351722 Low Low
cufflinks 0.714347 0.0 2.5464    
cufflinks 0.104338 0.0 0.439931 Low  
cufflinks 0.698827 0.0 2.49508    
cufflinks 0.0327492 0.0 0.154723 Low Low
cufflinks 0.937835 0.0 3.26586    

0 Strain