Gene : Phvul.001G154200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11814:SF60 - SULFATE TRANSPORTER 3.1-RELATED Genomic Order:  1517
Name:  ? Phvul.001G154200 Secondary Identifier:  ? PAC:37169994
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G154200 0.5kb upstream 0.5kb upstream 7788 true Chr01: 40435448-40443235 Phaseolus vulgaris
Phvul.001G154200 0.5kb upstream 0.5kb upstream 500 false Chr01: 40442736-40443235 Phaseolus vulgaris
Phvul.001G154200 0.5kb downstream 0.5kb downstream 7788 true Chr01: 40434948-40442735 Phaseolus vulgaris
Phvul.001G154200 0.5kb downstream 0.5kb downstream 500 false Chr01: 40434948-40435447 Phaseolus vulgaris
Phvul.001G154200 1.0kb upstream 1.0kb upstream 8288 true Chr01: 40435448-40443735 Phaseolus vulgaris
Phvul.001G154200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40442736-40443735 Phaseolus vulgaris
Phvul.001G154200 1.0kb downstream 1.0kb downstream 8288 true Chr01: 40434448-40442735 Phaseolus vulgaris
Phvul.001G154200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40434448-40435447 Phaseolus vulgaris
Phvul.001G154200 2.0kb upstream 2.0kb upstream 9288 true Chr01: 40435448-40444735 Phaseolus vulgaris
Phvul.001G154200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40442736-40444735 Phaseolus vulgaris
Phvul.001G154200 2.0kb downstream 2.0kb downstream 9288 true Chr01: 40433448-40442735 Phaseolus vulgaris
Phvul.001G154200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40433448-40435447 Phaseolus vulgaris
Phvul.001G154200 5.0kb upstream 5.0kb upstream 12288 true Chr01: 40435448-40447735 Phaseolus vulgaris
Phvul.001G154200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40442736-40447735 Phaseolus vulgaris
Phvul.001G154200 5.0kb downstream 5.0kb downstream 12288 true Chr01: 40430448-40442735 Phaseolus vulgaris
Phvul.001G154200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40430448-40435447 Phaseolus vulgaris
Phvul.001G154200 10.0kb upstream 10.0kb upstream 17288 true Chr01: 40435448-40452735 Phaseolus vulgaris
Phvul.001G154200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40442736-40452735 Phaseolus vulgaris
Phvul.001G154200 10.0kb downstream 10.0kb downstream 17288 true Chr01: 40425448-40442735 Phaseolus vulgaris
Phvul.001G154200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40425448-40435447 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303560 5265 Fabidae View MSA
124072725 5270 Rosid View MSA
123745281 5271 Pentapetalae View MSA
122794786 5272 Eudicot View MSA
122043388 5273 Angiosperm View MSA
123429043 5275 Viridiplantae View MSA
121310116 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5779 0.0 30.3349    
cufflinks 15.037 0.0 39.001    
cufflinks 92.1736 0.0 264.278 High High
cufflinks 17.6305 0.0 45.6311    
cufflinks 49.3863 0.0 132.103 High High
cufflinks 36.3907 0.0 95.6808 High  
cufflinks 9.52 0.0 25.2315    
cufflinks 3.6609 0.0 10.5089   Low
cufflinks 21.2514 0.0 54.9373    
cufflinks 12.8982 0.0 33.6289    
cufflinks 16.2969 0.0 42.2402    

0 Strain