Gene : Phvul.001G156600 P. vulgaris v2.1
Defline:  (1 of 28) K14484 - auxin-responsive protein IAA (IAA) Genomic Order:  1543
Name:  ? Phvul.001G156600 Secondary Identifier:  ? PAC:37170220
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G156600 0.5kb upstream 0.5kb upstream 3672 true Chr01: 40808728-40812399 Phaseolus vulgaris
Phvul.001G156600 0.5kb upstream 0.5kb upstream 500 false Chr01: 40808728-40809227 Phaseolus vulgaris
Phvul.001G156600 0.5kb downstream 0.5kb downstream 3672 true Chr01: 40809228-40812899 Phaseolus vulgaris
Phvul.001G156600 0.5kb downstream 0.5kb downstream 500 false Chr01: 40812400-40812899 Phaseolus vulgaris
Phvul.001G156600 1.0kb upstream 1.0kb upstream 4172 true Chr01: 40808228-40812399 Phaseolus vulgaris
Phvul.001G156600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40808228-40809227 Phaseolus vulgaris
Phvul.001G156600 1.0kb downstream 1.0kb downstream 4172 true Chr01: 40809228-40813399 Phaseolus vulgaris
Phvul.001G156600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40812400-40813399 Phaseolus vulgaris
Phvul.001G156600 2.0kb upstream 2.0kb upstream 5172 true Chr01: 40807228-40812399 Phaseolus vulgaris
Phvul.001G156600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40807228-40809227 Phaseolus vulgaris
Phvul.001G156600 2.0kb downstream 2.0kb downstream 5172 true Chr01: 40809228-40814399 Phaseolus vulgaris
Phvul.001G156600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40812400-40814399 Phaseolus vulgaris
Phvul.001G156600 5.0kb upstream 5.0kb upstream 8172 true Chr01: 40804228-40812399 Phaseolus vulgaris
Phvul.001G156600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40804228-40809227 Phaseolus vulgaris
Phvul.001G156600 5.0kb downstream 5.0kb downstream 8172 true Chr01: 40809228-40817399 Phaseolus vulgaris
Phvul.001G156600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40812400-40817399 Phaseolus vulgaris
Phvul.001G156600 10.0kb upstream 10.0kb upstream 13172 true Chr01: 40799228-40812399 Phaseolus vulgaris
Phvul.001G156600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40799228-40809227 Phaseolus vulgaris
Phvul.001G156600 10.0kb downstream 10.0kb downstream 13172 true Chr01: 40809228-40822399 Phaseolus vulgaris
Phvul.001G156600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40812400-40822399 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309367 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 154.671 0.0 448.288 High  
cufflinks 113.74 0.0 318.39 High  
cufflinks 29.028 0.0 75.0318    
cufflinks 275.894 0.0 868.121 High High
cufflinks 157.698 0.0 457.584 High  
cufflinks 28.255 0.0 73.0401    
cufflinks 30.2603 0.0 78.2249 High  
cufflinks 80.6386 0.0 218.993 High  
cufflinks 32.5534 0.0 84.1962 High  
cufflinks 15.8116 0.0 41.7221   Low
cufflinks 146.452 0.0 421.501 High  

0 Strain