Gene : Phvul.001G140200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10024:SF243 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  1378
Name:  ? Phvul.001G140200 Secondary Identifier:  ? PAC:37169792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G140200 0.5kb upstream 0.5kb upstream 4384 true Chr01: 38213998-38218381 Phaseolus vulgaris
Phvul.001G140200 0.5kb upstream 0.5kb upstream 500 false Chr01: 38217882-38218381 Phaseolus vulgaris
Phvul.001G140200 0.5kb downstream 0.5kb downstream 4384 true Chr01: 38213498-38217881 Phaseolus vulgaris
Phvul.001G140200 0.5kb downstream 0.5kb downstream 500 false Chr01: 38213498-38213997 Phaseolus vulgaris
Phvul.001G140200 1.0kb upstream 1.0kb upstream 4884 true Chr01: 38213998-38218881 Phaseolus vulgaris
Phvul.001G140200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38217882-38218881 Phaseolus vulgaris
Phvul.001G140200 1.0kb downstream 1.0kb downstream 4884 true Chr01: 38212998-38217881 Phaseolus vulgaris
Phvul.001G140200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38212998-38213997 Phaseolus vulgaris
Phvul.001G140200 2.0kb upstream 2.0kb upstream 5884 true Chr01: 38213998-38219881 Phaseolus vulgaris
Phvul.001G140200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38217882-38219881 Phaseolus vulgaris
Phvul.001G140200 2.0kb downstream 2.0kb downstream 5884 true Chr01: 38211998-38217881 Phaseolus vulgaris
Phvul.001G140200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38211998-38213997 Phaseolus vulgaris
Phvul.001G140200 5.0kb upstream 5.0kb upstream 8884 true Chr01: 38213998-38222881 Phaseolus vulgaris
Phvul.001G140200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38217882-38222881 Phaseolus vulgaris
Phvul.001G140200 5.0kb downstream 5.0kb downstream 8884 true Chr01: 38208998-38217881 Phaseolus vulgaris
Phvul.001G140200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38208998-38213997 Phaseolus vulgaris
Phvul.001G140200 10.0kb upstream 10.0kb upstream 13884 true Chr01: 38213998-38227881 Phaseolus vulgaris
Phvul.001G140200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38217882-38227881 Phaseolus vulgaris
Phvul.001G140200 10.0kb downstream 10.0kb downstream 13884 true Chr01: 38203998-38217881 Phaseolus vulgaris
Phvul.001G140200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38203998-38213997 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309147 5265 Fabidae View MSA
124067885 5270 Rosid View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.65656 0.0 20.0506   Low
cufflinks 33.5513 0.0 90.3698 High High
cufflinks 21.2013 0.0 55.4559    
cufflinks 23.0239 0.0 60.1588    
cufflinks 23.7491 0.0 62.278    
cufflinks 40.6753 0.0 111.617 High High
cufflinks 17.0715 0.0 44.2819    
cufflinks 15.5979 0.0 40.396    
cufflinks 17.4592 0.0 45.2847    
cufflinks 16.9597 0.0 43.954    
cufflinks 27.198 0.0 71.9013    

0 Strain