Gene : Phvul.001G140300 P. vulgaris v2.1
Defline:  (1 of 2) K16810 - TBCC domain-containing protein 1 (TBCCD1) Genomic Order:  1379
Name:  ? Phvul.001G140300 Secondary Identifier:  ? PAC:37169926
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G140300 0.5kb upstream 0.5kb upstream 12347 true Chr01: 38240439-38252785 Phaseolus vulgaris
Phvul.001G140300 0.5kb upstream 0.5kb upstream 500 false Chr01: 38240439-38240938 Phaseolus vulgaris
Phvul.001G140300 0.5kb downstream 0.5kb downstream 12347 true Chr01: 38240939-38253285 Phaseolus vulgaris
Phvul.001G140300 0.5kb downstream 0.5kb downstream 500 false Chr01: 38252786-38253285 Phaseolus vulgaris
Phvul.001G140300 1.0kb upstream 1.0kb upstream 12847 true Chr01: 38239939-38252785 Phaseolus vulgaris
Phvul.001G140300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38239939-38240938 Phaseolus vulgaris
Phvul.001G140300 1.0kb downstream 1.0kb downstream 12847 true Chr01: 38240939-38253785 Phaseolus vulgaris
Phvul.001G140300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38252786-38253785 Phaseolus vulgaris
Phvul.001G140300 2.0kb upstream 2.0kb upstream 13847 true Chr01: 38238939-38252785 Phaseolus vulgaris
Phvul.001G140300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38238939-38240938 Phaseolus vulgaris
Phvul.001G140300 2.0kb downstream 2.0kb downstream 13847 true Chr01: 38240939-38254785 Phaseolus vulgaris
Phvul.001G140300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38252786-38254785 Phaseolus vulgaris
Phvul.001G140300 5.0kb upstream 5.0kb upstream 16847 true Chr01: 38235939-38252785 Phaseolus vulgaris
Phvul.001G140300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38235939-38240938 Phaseolus vulgaris
Phvul.001G140300 5.0kb downstream 5.0kb downstream 16847 true Chr01: 38240939-38257785 Phaseolus vulgaris
Phvul.001G140300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38252786-38257785 Phaseolus vulgaris
Phvul.001G140300 10.0kb upstream 10.0kb upstream 21847 true Chr01: 38230939-38252785 Phaseolus vulgaris
Phvul.001G140300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38230939-38240938 Phaseolus vulgaris
Phvul.001G140300 10.0kb downstream 10.0kb downstream 21847 true Chr01: 38240939-38262785 Phaseolus vulgaris
Phvul.001G140300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38252786-38262785 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309249 5265 Fabidae View MSA
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7212 0.0 33.1942   Low
cufflinks 16.5999 0.0 42.9905    
cufflinks 15.2013 0.0 39.4517    
cufflinks 17.3989 0.0 45.0133    
cufflinks 18.9872 0.0 49.0915   High
cufflinks 14.5915 0.0 37.9115    
cufflinks 14.2838 0.0 37.1158    
cufflinks 13.688 0.0 35.6125    
cufflinks 15.9013 0.0 41.2254    
cufflinks 13.3743 0.0 34.8356   Low
cufflinks 20.6627 0.0 53.4092   High

0 Strain