Gene : Phvul.001G143800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13009 - HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 Genomic Order:  1415
Name:  ? Phvul.001G143800 Secondary Identifier:  ? PAC:37170138
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G143800 0.5kb upstream 0.5kb upstream 2243 true Chr01: 38746987-38749229 Phaseolus vulgaris
Phvul.001G143800 0.5kb upstream 0.5kb upstream 500 false Chr01: 38748730-38749229 Phaseolus vulgaris
Phvul.001G143800 0.5kb downstream 0.5kb downstream 2243 true Chr01: 38746487-38748729 Phaseolus vulgaris
Phvul.001G143800 0.5kb downstream 0.5kb downstream 500 false Chr01: 38746487-38746986 Phaseolus vulgaris
Phvul.001G143800 1.0kb upstream 1.0kb upstream 2743 true Chr01: 38746987-38749729 Phaseolus vulgaris
Phvul.001G143800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38748730-38749729 Phaseolus vulgaris
Phvul.001G143800 1.0kb downstream 1.0kb downstream 2743 true Chr01: 38745987-38748729 Phaseolus vulgaris
Phvul.001G143800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38745987-38746986 Phaseolus vulgaris
Phvul.001G143800 2.0kb upstream 2.0kb upstream 3743 true Chr01: 38746987-38750729 Phaseolus vulgaris
Phvul.001G143800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38748730-38750729 Phaseolus vulgaris
Phvul.001G143800 2.0kb downstream 2.0kb downstream 3743 true Chr01: 38744987-38748729 Phaseolus vulgaris
Phvul.001G143800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38744987-38746986 Phaseolus vulgaris
Phvul.001G143800 5.0kb upstream 5.0kb upstream 6743 true Chr01: 38746987-38753729 Phaseolus vulgaris
Phvul.001G143800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38748730-38753729 Phaseolus vulgaris
Phvul.001G143800 5.0kb downstream 5.0kb downstream 6743 true Chr01: 38741987-38748729 Phaseolus vulgaris
Phvul.001G143800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38741987-38746986 Phaseolus vulgaris
Phvul.001G143800 10.0kb upstream 10.0kb upstream 11743 true Chr01: 38746987-38758729 Phaseolus vulgaris
Phvul.001G143800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38748730-38758729 Phaseolus vulgaris
Phvul.001G143800 10.0kb downstream 10.0kb downstream 11743 true Chr01: 38736987-38748729 Phaseolus vulgaris
Phvul.001G143800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38736987-38746986 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301543 5265 Fabidae View MSA
124068494 5270 Rosid View MSA
123738281 5271 Pentapetalae View MSA
122785985 5272 Eudicot View MSA
122047142 5273 Angiosperm View MSA
121345580 5274 Embryophyte View MSA
123425106 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.5428 0.0 92.6616 High  
cufflinks 75.7157 0.0 208.004 High High
cufflinks 18.7911 0.0 48.7817   Low
cufflinks 70.1698 0.0 191.181 High High
cufflinks 30.7592 0.0 79.7229    
cufflinks 19.1062 0.0 49.5011   Low
cufflinks 25.6298 0.0 66.3114    
cufflinks 38.4959 0.0 100.569 High  
cufflinks 28.7569 0.0 74.5447    
cufflinks 26.2539 0.0 67.8844    
cufflinks 36.9422 0.0 96.4345 High  

0 Strain