Gene : Phvul.001G142200 P. vulgaris v2.1
Defline:  (1 of 2) K02328 - DNA polymerase delta subunit 2 (POLD2) Genomic Order:  1398
Name:  ? Phvul.001G142200 Secondary Identifier:  ? PAC:37169976
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G142200 0.5kb upstream 0.5kb upstream 6644 true Chr01: 38528156-38534799 Phaseolus vulgaris
Phvul.001G142200 0.5kb upstream 0.5kb upstream 500 false Chr01: 38528156-38528655 Phaseolus vulgaris
Phvul.001G142200 0.5kb downstream 0.5kb downstream 6644 true Chr01: 38528656-38535299 Phaseolus vulgaris
Phvul.001G142200 0.5kb downstream 0.5kb downstream 500 false Chr01: 38534800-38535299 Phaseolus vulgaris
Phvul.001G142200 1.0kb upstream 1.0kb upstream 7144 true Chr01: 38527656-38534799 Phaseolus vulgaris
Phvul.001G142200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38527656-38528655 Phaseolus vulgaris
Phvul.001G142200 1.0kb downstream 1.0kb downstream 7144 true Chr01: 38528656-38535799 Phaseolus vulgaris
Phvul.001G142200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38534800-38535799 Phaseolus vulgaris
Phvul.001G142200 2.0kb upstream 2.0kb upstream 8144 true Chr01: 38526656-38534799 Phaseolus vulgaris
Phvul.001G142200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38526656-38528655 Phaseolus vulgaris
Phvul.001G142200 2.0kb downstream 2.0kb downstream 8144 true Chr01: 38528656-38536799 Phaseolus vulgaris
Phvul.001G142200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38534800-38536799 Phaseolus vulgaris
Phvul.001G142200 5.0kb upstream 5.0kb upstream 11144 true Chr01: 38523656-38534799 Phaseolus vulgaris
Phvul.001G142200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38523656-38528655 Phaseolus vulgaris
Phvul.001G142200 5.0kb downstream 5.0kb downstream 11144 true Chr01: 38528656-38539799 Phaseolus vulgaris
Phvul.001G142200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38534800-38539799 Phaseolus vulgaris
Phvul.001G142200 10.0kb upstream 10.0kb upstream 16144 true Chr01: 38518656-38534799 Phaseolus vulgaris
Phvul.001G142200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38518656-38528655 Phaseolus vulgaris
Phvul.001G142200 10.0kb downstream 10.0kb downstream 16144 true Chr01: 38528656-38544799 Phaseolus vulgaris
Phvul.001G142200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38534800-38544799 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309053 5265 Fabidae View MSA
124068297 5270 Rosid View MSA
123738426 5271 Pentapetalae View MSA
122789684 5272 Eudicot View MSA
122043258 5273 Angiosperm View MSA
121345903 5274 Embryophyte View MSA
123424957 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33167 0.0 4.54631   Low
cufflinks 2.29319 0.0 7.36492    
cufflinks 4.62394 0.0 13.6529    
cufflinks 2.08354 0.0 6.84185    
cufflinks 4.10797 0.0 12.4386    
cufflinks 3.32684 0.0 10.2283    
cufflinks 2.71867 0.0 8.55909    
cufflinks 5.29574 0.0 15.3572   High
cufflinks 3.36521 0.0 10.3851    
cufflinks 0.736367 0.0 2.67475   Low
cufflinks 3.14199 0.0 9.79547    

0 Strain