Gene : Phvul.001G142900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13871//PTHR13871:SF36 - THIOREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  1406
Name:  ? Phvul.001G142900 Secondary Identifier:  ? PAC:37170176
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G142900 0.5kb upstream 0.5kb upstream 2854 true Chr01: 38602787-38605640 Phaseolus vulgaris
Phvul.001G142900 0.5kb upstream 0.5kb upstream 500 false Chr01: 38602787-38603286 Phaseolus vulgaris
Phvul.001G142900 0.5kb downstream 0.5kb downstream 2854 true Chr01: 38603287-38606140 Phaseolus vulgaris
Phvul.001G142900 0.5kb downstream 0.5kb downstream 500 false Chr01: 38605641-38606140 Phaseolus vulgaris
Phvul.001G142900 1.0kb upstream 1.0kb upstream 3354 true Chr01: 38602287-38605640 Phaseolus vulgaris
Phvul.001G142900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38602287-38603286 Phaseolus vulgaris
Phvul.001G142900 1.0kb downstream 1.0kb downstream 3354 true Chr01: 38603287-38606640 Phaseolus vulgaris
Phvul.001G142900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38605641-38606640 Phaseolus vulgaris
Phvul.001G142900 2.0kb upstream 2.0kb upstream 4354 true Chr01: 38601287-38605640 Phaseolus vulgaris
Phvul.001G142900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38601287-38603286 Phaseolus vulgaris
Phvul.001G142900 2.0kb downstream 2.0kb downstream 4354 true Chr01: 38603287-38607640 Phaseolus vulgaris
Phvul.001G142900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38605641-38607640 Phaseolus vulgaris
Phvul.001G142900 5.0kb upstream 5.0kb upstream 7354 true Chr01: 38598287-38605640 Phaseolus vulgaris
Phvul.001G142900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38598287-38603286 Phaseolus vulgaris
Phvul.001G142900 5.0kb downstream 5.0kb downstream 7354 true Chr01: 38603287-38610640 Phaseolus vulgaris
Phvul.001G142900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38605641-38610640 Phaseolus vulgaris
Phvul.001G142900 10.0kb upstream 10.0kb upstream 12354 true Chr01: 38593287-38605640 Phaseolus vulgaris
Phvul.001G142900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38593287-38603286 Phaseolus vulgaris
Phvul.001G142900 10.0kb downstream 10.0kb downstream 12354 true Chr01: 38603287-38615640 Phaseolus vulgaris
Phvul.001G142900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38605641-38615640 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310292 5265 Fabidae View MSA
124073817 5270 Rosid View MSA
123749081 5271 Pentapetalae View MSA
122772976 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.190583 0.0 0.772222 Low  
cufflinks 0.830391 0.0 2.9786   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.34884 0.0 1.34834 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0499474 0.0 0.22741 Low  
cufflinks 0.252626 0.0 0.994432 Low  
cufflinks 0.0269245 0.0 0.130777 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0485912 0.0 0.223869 Low  

0 Strain